setd1a (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000001921 T42823_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000004082 RRM 82 149

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SETD1A Tetraodon nigroviridis ENSTNIG00000014930 N 0.779
SETD1A Oryzias latipes ENSORLG00000002213 N 0.765
SETD1A Procavia capensis ENSPCAG00000014351 N 0.765
ENSPPYG00000007296 Pongo pygmaeus ENSPPYG00000007296 N 0.765
SETD1A Ochotona princeps ENSOPRG00000016034 N 0.765
SETD1A Pan troglodytes ENSPTRG00000008024 N 0.765
SETD1A Ornithorhynchus anatinus ENSOANG00000013155 N 0.765
SETD1A Oryctolagus cuniculus ENSOCUG00000022182 N 0.765
Setd1a Mus musculus ENSMUSG00000042308 N 0.765
Q4G026_RAT Rattus norvegicus ENSRNOG00000019045 N 0.765
SETD1A Takifugu rubripes ENSTRUG00000008953 N 0.765
SETD1A Tarsius syrichta ENSTSYG00000014425 N 0.765
SETD1A Tursiops truncatus ENSTTRG00000015493 N 0.765
SETD1A Tupaia belangeri ENSTBEG00000009714 N 0.765
SETD1A Sus scrofa ENSSSCG00000007782 N 0.765
SETD1A Macropus eugenii ENSMEUG00000003396 N 0.765
SETD1A Sorex araneus ENSSARG00000005591 N 0.765
SETD1A Pteropus vampyrus ENSPVAG00000011049 N 0.765
SETD1A Monodelphis domestica ENSMODG00000001726 N 0.765
SETD1A Homo sapiens ENSG00000099381 N 0.765
SETD1A Felis catus ENSFCAG00000002588 N 0.765
LOC100415635 Callithrix jacchus ENSCJAG00000003000 N 0.765
SETD1A Cavia porcellus ENSCPOG00000025456 N 0.765
SETD1A Canis familiaris ENSCAFG00000016758 N 0.765
Ame_R013286 Ailuropoda melanoleuca Ame_R013286 N 0.765
SETD1A Bos taurus ENSBTAG00000002345 N 0.765
SETD1A Loxodonta africana ENSLAFG00000023335 N 0.765
SETD1A Gorilla gorilla ENSGGOG00000016052 N 0.765
SETD1A Gasterosteus aculeatus ENSGACG00000013688 N 0.750
SETD1A Echinops telfairi ENSETEG00000014170 N 0.750
ENSDARG00000078930 Danio rerio ENSDARG00000078930 N 0.735
setd1b Xenopus tropicalis ENSXETG00000003760 N 0.735
setd1ba Danio rerio ENSDARG00000060847 N 0.735
SETD1B Taeniopygia guttata ENSTGUG00000006093 N 0.721
AAH81016 Xenopus laevis AAH81016 N 0.706
SETD1B Meleagris gallopavo ENSMGAG00000004421 N 0.706
SETD1B Takifugu rubripes ENSTRUG00000009533 N 0.706
Q66J90 Xenopus laevis Q66J90 N 0.706
SET1B_CHICK Gallus gallus ENSGALG00000004324 N 0.706
SETD1B Anolis carolinensis ENSACAG00000011162 N 0.706
SETD1B Monodelphis domestica ENSMODG00000023734 N 0.706