CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GL18179
(
Drosophila persimilis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0155782
T43722_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0182286
RRM
972
1036
LLLKNLTAQIDGPTLRTLCMQHGPLVSFHLYLNQGIALCKYTTREEASKAQMALNNCVLGNTTIF
Links
Other
RRM
family RBPs
Other
Drosophila persimilis
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_01003
Puccinia triticina
PTTG_01003
N
0.000
C27B7.5
Caenorhabditis elegans
C27B7.5
N
0.000
BRADI3G11560
Brachypodium distachyon
BRADI3G11560
N
0.000
PTTG_10119
Puccinia triticina
PTTG_10119
N
0.000
PTTG_08980
Puccinia triticina
PTTG_08980
N
0.000
PTTG_08372
Puccinia triticina
PTTG_08372
N
0.000
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.000
PTTG_06677
Puccinia triticina
PTTG_06677
N
0.000
PTTG_05387
Puccinia triticina
PTTG_05387
N
0.000
PTTG_05279
Puccinia triticina
PTTG_05279
N
0.000
PTTG_04681
Puccinia triticina
PTTG_04681
N
0.000
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.000
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.000
CJA13127
Caenorhabditis japonica
CJA13127
N
0.000