GJ23846 (Drosophila virilis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0210941 T44129_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
rump
M288_0.6 		Drosophila melanogaster Sequence logo not available GGAGG RIP-chip
Cook et al.(2011)
34_15781475 		0.941
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0238263 RRM 62 132
FBpp0238263 RRM 227 296
FBpp0238263 RRM 577 640

Links

Other RRM family RBPs
Other Drosophila virilis RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
rump Drosophila melanogaster FBgn0260010 D 0.941
GE24772 Drosophila yakuba FBgn0241875 I 0.946
GK14301 Drosophila willistoni FBgn0216307 I 0.951
GD20792 Drosophila simulans FBgn0192255 I 0.941
GM26253 Drosophila sechellia FBgn0181108 I 0.941
GL22228 Drosophila persimilis FBgn0159820 I 0.956
GI22600 Drosophila mojavensis FBgn0145328 I 0.995
GH19397 Drosophila grimshawi FBgn0126862 I 0.985
GG17367 Drosophila erecta FBgn0109594 I 0.946
GF16058 Drosophila ananassae FBgn0093080 I 0.951
GA21738-RA Drosophila pseudoobscura FBgn0081723 I 0.956
CPIJ011705 Culex quinquefasciatus CPIJ011705 I 0.761
AGAP001460 Anopheles gambiae AGAP001460 I 0.766
AAEL003670 Aedes aegypti AAEL003670 I 0.761
CpipJ_CPIJ011705 Culex pipiens CpipJ_CPIJ011705 I 0.761