GD20792 (Drosophila simulans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0192255 T43984_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
rump
M288_0.6 		Drosophila melanogaster Sequence logo not available GGAGG RIP-chip
Cook et al.(2011)
34_15781475 		0.985
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0219194 RRM 59 129
FBpp0219194 RRM 236 305
FBpp0219194 RRM 567 630

Links

Other RRM family RBPs
Other Drosophila simulans RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GM26253 Drosophila sechellia FBgn0181108 I 1.000
GE24772 Drosophila yakuba FBgn0241875 I 0.995
GG17367 Drosophila erecta FBgn0109594 I 0.995
GA21738-RA Drosophila pseudoobscura FBgn0081723 I 0.985
GL22228 Drosophila persimilis FBgn0159820 I 0.985
rump Drosophila melanogaster FBgn0260010 D 0.985
GF16058 Drosophila ananassae FBgn0093080 I 0.980
GK14301 Drosophila willistoni FBgn0216307 I 0.956
GJ23846 Drosophila virilis FBgn0210941 I 0.941
GH19397 Drosophila grimshawi FBgn0126862 I 0.941
GI22600 Drosophila mojavensis FBgn0145328 I 0.937
AGAP001460 Anopheles gambiae AGAP001460 I 0.761
CPIJ011705 Culex quinquefasciatus CPIJ011705 I 0.756
CpipJ_CPIJ011705 Culex pipiens CpipJ_CPIJ011705 I 0.756
AAEL003670 Aedes aegypti AAEL003670 I 0.756