POPTR_0018s02740 (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0018s02740 T45700_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0018s02740.1 RRM 189 262

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A1L532_BOVIN Bos taurus ENSBTAG00000016929 N 0.000
HNRNPA0 Oryzias latipes ENSORLG00000000221 N 0.000
ENSPPYG00000015814 Pongo pygmaeus ENSPPYG00000015814 N 0.000
HNRNPA0 Pan troglodytes ENSPTRG00000017273 N 0.000
Hnrnpa0 Rattus norvegicus ENSRNOG00000039876 N 0.000
HNRNPA0 Sus scrofa ENSSSCG00000014322 N 0.000
HNRNPA0 Taeniopygia guttata ENSTGUG00000001186 N 0.000
HNRNPA0 Tetraodon nigroviridis ENSTNIG00000007398 N 0.000
HNRNPA0 Takifugu rubripes ENSTRUG00000015362 N 0.000
HNRNPA0 Tursiops truncatus ENSTTRG00000000499 N 0.000
hnrnpa0 Xenopus tropicalis ENSXETG00000003833 N 0.000
Ame_R010989 Ailuropoda melanoleuca Ame_R010989 N 0.000
AAH41277 Xenopus laevis AAH41277 N 0.000
AAH45023 Xenopus laevis AAH45023 N 0.000
AAH71067 Xenopus laevis AAH71067 N 0.000
HNRNPA0 Oryctolagus cuniculus ENSOCUG00000005703 N 0.000
HNRNPA0 Ornithorhynchus anatinus ENSOANG00000012169 N 0.000
Hnrnpa0 Mus musculus ENSMUSG00000007836 N 0.000
LOC100399260 Callithrix jacchus ENSCJAG00000006112 N 0.000
HNRNPA0 Cavia porcellus ENSCPOG00000026092 N 0.000
hnrnpa0 Danio rerio ENSDARG00000036162 N 0.000
HNRNPA0 Homo sapiens ENSG00000177733 N 0.000
HNRNPA0 Gasterosteus aculeatus ENSGACG00000016447 N 0.000
HNRNPA0 Gallus gallus ENSGALG00000006160 N 0.000
HNRNPA0 Gorilla gorilla ENSGGOG00000023303 N 0.000
HNRNPA0 Loxodonta africana ENSLAFG00000028290 N 0.000
ENSMEUG00000008352 Macropus eugenii ENSMEUG00000008352 N 0.000
ENSMEUG00000013675 Macropus eugenii ENSMEUG00000013675 N 0.000
HNRNPA0 Meleagris gallopavo ENSMGAG00000007915 N 0.000
HNRNPA0 Macaca mulatta ENSMMUG00000011929 N 0.000
XM_001373740.1 Monodelphis domestica ENSMODG00000002463 N 0.000
HNRNPA0 Monodelphis domestica ENSMODG00000014720 N 0.000
AAI06306 Xenopus laevis AAI06306 N 0.000