estExt_fgenesh1_pg.C_10219 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_10219 T50455_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_10219 RRM 73 143

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_052310 Penicillium marneffei PMAA_052310 N 0.775
estExt_fgenesh2_pg.C_21066 Thielavia terrestris estExt_fgenesh2_pg.C_21066 N 0.746
estExt_fgenesh1_pg.C_40358 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40358 N 0.817
estExt_fgenesh1_kg.C_30108 Myceliophthora thermophila estExt_fgenesh1_kg.C_30108 N 0.761
NCU04164 Neurospora crassa NCU04164 N 0.789
NFIA_026460 Neosartorya fischeri CADNFIAG00002567 N 0.803
ATEG_06451 Aspergillus terreus CADATEAG00007044 N 0.803
AO090005000269 Aspergillus oryzae CADAORAG00002284 N 0.803
ANIA_06676 Aspergillus nidulans CADANIAG00007461 N 0.789
An07g02990 Aspergillus niger CADANGAG00005571 N 0.803
estExt_Genewise1.C_180314 Trichoderma reesei estExt_Genewise1.C_180314 N 0.803
estExt_Genewise1Plus.C_12199 Neurospora discreta estExt_Genewise1Plus.C_12199 N 0.789
estExt_Genewise1Plus.C_chr_40253 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40253 N 0.901
Pc12g05910 Penicillium chrysogenum Pc12g05910 N 0.789
Pa_2_11080 Podospora anserina Pa_2_11080 N 0.746
fgenesh1_pm.00771_#_149 Aspergillus carbonarius fgenesh1_pm.00771_#_149 N 0.803
estExt_Genewise1Plus.C_130074 Cryphonectria parasitica estExt_Genewise1Plus.C_130074 N 0.789
AB06486.1 Alternaria brassicicola AB06486.1 N 0.845
EAT92286.2 Phaeosphaeria nodorum EAT92286.2 N 0.831
scaffold_1-snap.352.1 Neurospora tetrasperma scaffold_1-snap.352.1 N 0.789
gw1.13.356.1 Trichoderma atroviride gw1.13.356.1 N 0.789
fgenesh1_pg.C_scaffold_28000022 Trichoderma virens fgenesh1_pg.C_scaffold_28000022 N 0.803
estExt_Genewise1Plus.C_sca_14_chr10_3_00018 Nectria haematococca estExt_Genewise1Plus.C_sca_14_chr10_3_00018 N 0.817
AFUA_7G05260 Aspergillus fumigatus CADAFUAG00009507 N 0.803
AFLA_075060 Aspergillus flavus CADAFLAG00000288 N 0.803
ACLA_006960 Aspergillus clavatus CADACLAG00000697 N 0.789
HCAG_04664 Histoplasma capsulatum HCAG_04664 N 0.817
GLRG_01286 Colletotrichum graminicola GLRG_01286 N 0.803
FVEG_07344 Fusarium verticillioides FVEG_07344 N 0.831
FOXG_04224 Fusarium oxysporum FOXG_04224 N 0.831
FGSG_01904 Fusarium graminearum FGSG_01904 N 0.817
CPSG_07669 Coccidioides posadasii CPSG_07669 N 0.732
CIMG_04697 Coccidioides immitis CIMG_04697 N 0.732
CHGG_07146 Chaetomium globosum CHGG_07146 N 0.746
BDBG_04556 Blastomyces dermatitidis BDBG_04556 N 0.803
BC1G_05132 Botrytis cinerea BC1G_05132 N 0.845
MCYG_05842 Microsporum canis MCYG_05842 N 0.732
MGG_07511 Magnaporthe oryzae MGG_07511 N 0.817
MGYG_06129 Microsporum gypseum MGYG_06129 N 0.732
VDBG_09339 Verticillium albo atrum VDBG_09339 N 0.817
VDAG_04577 Verticillium dahliae VDAG_04577 N 0.817
TRV_06236 Trichophyton verrucosum TRV_06236 N 0.718
TESG_06970 Trichophyton tonsurans TESG_06970 N 0.718
TERG_06272 Trichophyton rubrum TERG_06272 N 0.718
TEQG_06803 Trichophyton equinum TEQG_06803 N 0.718
SS1G_07495 Sclerotinia sclerotiorum SS1G_07495 N 0.845
SNOG_00791 Stagonospora nodorum SNOG_00791 N 0.831
PTRG_07268 Pyrenophora tritici repentis PTRG_07268 N 0.831
PABG_06275 Paracoccidioides brasiliensis PABG_06275 N 0.817
ARB_04443 Arthroderma benhamiae ARB_04443 N 0.000