estExt_fgenesh1_pm.C_120017 (Batrachochytrium dendrobatidis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_120017 T50695_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_120017 RRM 13 83
estExt_fgenesh1_pm.C_120017 RRM 100 171

Links

Other RRM family RBPs
Other Batrachochytrium dendrobatidis RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTSG_00878 Salpingoeca rosetta PTSG_00878 I 0.706
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.713
RO3G_15452 Rhizopus oryzae RO3G_15452 I 0.720
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.727
e_gw1.2.2306.1 Schizophyllum commune e_gw1.2.2306.1 I 0.706
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.713
FER_chlre3.3.376.1.5 Chlamydomonas reinhardtii FER_chlre3.3.376.1.5 I 0.713
estExt_Genemark1.C_60101 Coccomyxa C 169 estExt_Genemark1.C_60101 I 0.706
estExt_Genewise1.C_60440 Chlorella vulgaris estExt_Genewise1.C_60440 I 0.706