e_gw1.2.2306.1 (Schizophyllum commune)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.2.2306.1 T49867_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Smp_067420
M201_0.6 		Schistosoma mansoni DWWUUUU RNAcompete
Ray et al.(2013)
RNCMPT00232 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.2.2306.1 RRM 15 85
e_gw1.2.2306.1 RRM 102 173

Links

Other RRM family RBPs
Other Schizophyllum commune RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_920074 Postia placenta estExt_Genewise1Plus.C_920074 I 0.930
estExt_fgenesh2_pm.C_20717 Agaricus bisporus estExt_fgenesh2_pm.C_20717 N 0.923
CC1G_10837 Coprinopsis cinerea CC1G_10837 N 0.923
genemark.276_g Pleurotus ostreatus genemark.276_g N 0.923
e_gwh2.1.820.1 Phanerochaete chrysosporium e_gwh2.1.820.1 N 0.923
estExt_GeneWisePlus_worm.C_60233 Laccaria bicolor estExt_GeneWisePlus_worm.C_60233 N 0.916
fgenesh2_kg.11_#_983_#_7076_1_CFOT Serpula lacrymans fgenesh2_kg.11_#_983_#_7076_1_CFOT N 0.916
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.916
estExt_fgenesh1_kg.C_70028 Melampsora laricis populina estExt_fgenesh1_kg.C_70028 N 0.811
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.762
e_gw1.6.467.1 Sporobolomyces roseus e_gw1.6.467.1 N 0.752
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.741
PredSwiss_CON266.4 Pneumocystis carinii PredSwiss_CON266.4 N 0.727
PredSwiss_ASS2010_2420.1 Pneumocystis carinii PredSwiss_ASS2010_2420.1 N 0.727
CNBG_4530 Cryptococcus neoformans CNBG_4530 N 0.720
Smp_067420 Schistosoma mansoni Smp_067420 D 0.720
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.720
RO3G_15452 Rhizopus oryzae RO3G_15452 I 0.713
ISCW010601 Ixodes scapularis ISCW010601 I 0.713
estExt_fgeneshTM_pm.C_30110 Tremella mesenterica estExt_fgeneshTM_pm.C_30110 N 0.713
estExt_Genewise1Plus.C_150062 Mycosphaerella fijiensis estExt_Genewise1Plus.C_150062 N 0.713
estExt_fgenesh1_pm.C_120017 Batrachochytrium dendrobatidis estExt_fgenesh1_pm.C_120017 N 0.706
estExt_Genewise1.C_sca_2060028 Lottia gigantea estExt_Genewise1.C_sca_2060028 I 0.706
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.706