SPPG_04182 (Spizellomyces punctatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SPPG_04182 T30839_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
sf3b4
M195_0.6 		Danio rerio CAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00224 		0.785
Smp_067420
M201_0.6 		Schistosoma mansoni DWWUUUU RNAcompete
Ray et al.(2013)
RNCMPT00232 		0.769
estExt_gwp_gw1.C_700168
M205_0.6 		Physcomitrella patens WUGGAG RNAcompete
Ray et al.(2013)
RNCMPT00237 		0.762
sap-49
M261_0.6 		Caenorhabditis elegans CGUGUGAG SELEX
Cook et al.(2011)
145_9163526 		0.706
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
SPPG_04182T0 RRM 14 84
SPPG_04182T0 RRM 101 172

Links

Other RRM family RBPs
Other Spizellomyces punctatus RBPs

140 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMODG00000018767 Monodelphis domestica ENSMODG00000018767 I 0.797
SF3B4 Macaca mulatta ENSMMUG00000007256 I 0.797
Sf3b4 Mus musculus ENSMUSG00000068856 I 0.797
ENSOCUG00000004614 Oryctolagus cuniculus ENSOCUG00000004614 I 0.797
ENSOPRG00000010808 Ochotona princeps ENSOPRG00000010808 I 0.797
SF3B4 Otolemur garnettii ENSOGAG00000006265 I 0.797
ENSMLUG00000010789 Myotis lucifugus ENSMLUG00000010789 I 0.797
SF3B4 Microcebus murinus ENSMICG00000000296 I 0.797
SF3B4 Gallus gallus ENSGALG00000013352 I 0.797
SF3B4 Gasterosteus aculeatus ENSGACG00000003819 I 0.797
SF3B4 Gorilla gorilla ENSGGOG00000004761 I 0.797
ENSLAFG00000008531 Loxodonta africana ENSLAFG00000008531 I 0.797
ENSMGAG00000000653 Meleagris gallopavo ENSMGAG00000000653 I 0.797
SF3B4 Oryzias latipes ENSORLG00000003062 I 0.797
ENSPVAG00000014171 Pteropus vampyrus ENSPVAG00000014171 I 0.797
sf3b4 Xenopus tropicalis ENSXETG00000011038 I 0.797
ENSVPAG00000008152 Vicugna pacos ENSVPAG00000008152 I 0.797
Ame_R019118 Ailuropoda melanoleuca Ame_R019118 I 0.797
fgenesh2_pg.scaffold_36000101 Branchiostoma floridae fgenesh2_pg.scaffold_36000101 I 0.797
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.797
estExt_fgenesh2_pm.C_9540001 Branchiostoma floridae estExt_fgenesh2_pm.C_9540001 I 0.797
ENSTTRG00000005217 Tursiops truncatus ENSTTRG00000005217 I 0.797
SF3B4 Tarsius syrichta ENSTSYG00000009295 I 0.797
ENSSSCG00000006665 Sus scrofa ENSSSCG00000006665 I 0.797
Sf3b4 Rattus norvegicus ENSRNOG00000021181 I 0.797
SF3B4 Taeniopygia guttata ENSTGUG00000004470 I 0.797
SF3B4 Tetraodon nigroviridis ENSTNIG00000009156 I 0.797
SF3B4 Takifugu rubripes ENSTRUG00000004516 I 0.797
SF3B4 Homo sapiens ENSG00000143368 I 0.797
SF3B4 Pan troglodytes ENSPTRG00000001243 I 0.797
ENSCAFG00000011617 Canis familiaris ENSCAFG00000011617 I 0.797
ENSFCAG00000010106 Felis catus ENSFCAG00000010106 I 0.797
Q3MHE6_BOVIN Bos taurus ENSBTAG00000012495 I 0.797
A6MKC5_CALJA Callithrix jacchus ENSCJAG00000000793 I 0.797
ENSACAG00000010019 Anolis carolinensis ENSACAG00000010019 I 0.797
LOC100054350 Equus caballus ENSECAG00000024737 I 0.797
sf3b4 Danio rerio ENSDARG00000018574 D 0.797
ENSCPOG00000008267 Cavia porcellus ENSCPOG00000008267 I 0.797
ENSPCAG00000000392 Procavia capensis ENSPCAG00000000392 I 0.790
AAH77458 Xenopus laevis AAH77458 I 0.790
AAH45264 Xenopus laevis AAH45264 I 0.790
PK08238.1 Cannabis sativa PK08238.1 I 0.783
ISCW010601 Ixodes scapularis ISCW010601 I 0.783
30183.m001303 Ricinus communis 30183.m001303 I 0.783
ENSBTAG00000012793 Bos taurus ENSBTAG00000012793 I 0.783
estExt_Genewise1.C_sca_2060028 Lottia gigantea estExt_Genewise1.C_sca_2060028 I 0.783
ENSSTOG00000006570 Spermophilus tridecemlineatus ENSSTOG00000006570 I 0.779
LOC_Os10g31900 Oryza sativa LOC_Os10g31900 I 0.776
SB01G020190 Sorghum bicolor Sb01g020190 I 0.776
BGIOSIBCE032328 Oryza indica BGIOSIBCE032328 I 0.776
gw1.5.900.1 Ostreococcus RCC809 gw1.5.900.1 I 0.776
Medtr3g087340 Medicago truncatula Medtr3g087340 I 0.776
MDP0000131129 Malus x domestica MDP0000131129 I 0.776
estExt_Genewise1.C_230076 Capitella teleta estExt_Genewise1.C_230076 I 0.776
MDP0000320945 Malus x domestica MDP0000320945 I 0.776
Glyma09g00310.1 Glycine max Glyma09g00310.1 I 0.776
RO3G_15452 Rhizopus oryzae RO3G_15452 I 0.776
Cucsa.251850 Cucumis sativus Cucsa.251850 I 0.776
GSVIVG00018991001 Vitis vinifera GSVIVG00018991001 I 0.776
XP_002157695.1 Hydra magnipapillata XP_002157695.1 I 0.769
GRMZM2G170699 Zea mays GRMZM2G170699 I 0.769
Smp_067420 Schistosoma mansoni Smp_067420 D 0.769
estExt_Genewise1Plus.C_920074 Postia placenta estExt_Genewise1Plus.C_920074 I 0.769
cassava31033.valid.m1 Manihot esculenta cassava31033.valid.m1 I 0.769
nasonia_NCBI_hmm192414 Nasonia vitripennis nasonia_NCBI_hmm192414 I 0.769
B9HEU6_POPTR Populus trichocarpa POPTR_0007s12570 I 0.769
Glyma12g36950.1 Glycine max Glyma12g36950.1 I 0.762
GRMZM2G102639 Zea mays GRMZM2G102639 I 0.762
CpipJ_CPIJ014149 Culex pipiens CpipJ_CPIJ014149 I 0.762
AAEL013795 Aedes aegypti AAEL013795 I 0.762
PTSG_00878 Salpingoeca rosetta PTSG_00878 I 0.762
BRADI3G27920 Brachypodium distachyon BRADI3G27920 I 0.762
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.762
FER_chlre3.3.376.1.5 Chlamydomonas reinhardtii FER_chlre3.3.376.1.5 I 0.762
CPIJ014149 Culex quinquefasciatus CPIJ014149 I 0.762
e_gw1.2.2306.1 Schizophyllum commune e_gw1.2.2306.1 I 0.762
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.762
estExt_gwp_gw1.C_700168 Physcomitrella patens estExt_gwp_gw1.C_700168 D 0.762
ppa007508m Prunus persica ppa007508m I 0.762
e_gwh2.1.820.1 Phanerochaete chrysosporium e_gwh2.1.820.1 N 0.755
e_gwEuk.5.259.1 Ostreococcus lucimarinus e_gwEuk.5.259.1 I 0.755
estExt_Genemark1.C_60101 Coccomyxa C 169 estExt_Genemark1.C_60101 I 0.755
gw1.05.00.253.1 Ostreococcus tauri gw1.05.00.253.1 I 0.755
XP_784135.2 Strongylocentrotus purpuratus XP_784135.2 I 0.755
XP_001185838.1 Strongylocentrotus purpuratus XP_001185838.1 I 0.755
ENSMEUG00000003272 Macropus eugenii ENSMEUG00000003272 I 0.755
estExt_Genewise1.C_60440 Chlorella vulgaris estExt_Genewise1.C_60440 I 0.755
GH17589 Drosophila grimshawi FBgn0125059 I 0.755
XM_002886132.1 Arabidopsis lyrata fgenesh2_kg.3__3460__AT2G18510.1 I 0.755
GK19717 Drosophila willistoni FBgn0221715 I 0.755
GJ15655 Drosophila virilis FBgn0202845 I 0.755
GI16317 Drosophila mojavensis FBgn0139065 I 0.755
amel4_ncbi_hmm1889 Apis mellifera amel4_ncbi_hmm1889 I 0.755
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.748
estExt_gwp.C_590193 Nematostella vectensis estExt_gwp.C_590193 I 0.748
GE16738 Drosophila yakuba FBgn0234234 I 0.748
GG19577 Drosophila erecta FBgn0111779 I 0.748
GL21313 Drosophila persimilis FBgn0158906 I 0.748
99199 Helobdella robusta 99199 I 0.748
PHUM263440 Pediculus humanus PHUM263440 I 0.748
GF20385 Drosophila ananassae FBgn0097392 I 0.748
GA17684-RA Drosophila pseudoobscura FBgn0077694 I 0.748
emb2444 Arabidopsis thaliana AT2G18510-TAIR-G I 0.748
AGAP001538 Anopheles gambiae AGAP001538 I 0.748
GM12470 Drosophila sechellia FBgn0167407 I 0.741
Spx Drosophila melanogaster FBgn0015818 I 0.741
AMAG_03157 Allomyces macrogynus AMAG_03157 I 0.741
SNAPOd2T00022637001 Oikopleura dioica SNAPOd2T00022637001 I 0.741
DGIL_AUG5s13542g6t1 Acyrtosiphon pisum DGIL_AUG5s13542g6t1 I 0.741
AMAG_10429 Allomyces macrogynus AMAG_10429 I 0.741
CC1G_10837 Coprinopsis cinerea CC1G_10837 N 0.741
ENSCAFG00000005753 Canis familiaris ENSCAFG00000005753 I 0.734
e_gw1.6.938.1 Trichoplax adhaerens e_gw1.6.938.1 I 0.734
estExt_fgenesh2_pm.C_20717 Agaricus bisporus estExt_fgenesh2_pm.C_20717 N 0.734
e_gw1.1.857.1 Daphnia pulex e_gw1.1.857.1 I 0.734
fgenesh2_kg.11_#_983_#_7076_1_CFOT Serpula lacrymans fgenesh2_kg.11_#_983_#_7076_1_CFOT N 0.734
genemark.276_g Pleurotus ostreatus genemark.276_g N 0.727
estExt_GeneWisePlus_worm.C_60233 Laccaria bicolor estExt_GeneWisePlus_worm.C_60233 N 0.727
estExt_fgenesh1_pm.C_120017 Batrachochytrium dendrobatidis estExt_fgenesh1_pm.C_120017 N 0.727
BC1G_13457 Botrytis cinerea BC1G_13457 N 0.720
gw1.3.260.1 Chlorella NC64A gw1.3.260.1 I 0.720
CAOG_06059 Capsaspora owczarzaki CAOG_06059 I 0.720
SS1G_09077 Sclerotinia sclerotiorum SS1G_09077 N 0.720
estExt_fgenesh1_kg.C_70028 Melampsora laricis populina estExt_fgenesh1_kg.C_70028 N 0.720
ANIA_06501 Aspergillus nidulans CADANIAG00007269 N 0.715
CPSG_00446 Coccidioides posadasii CPSG_00446 N 0.713
Aqu1.214461 Amphimedon queenslandica Aqu1.214461 I 0.713
UREG_03156 Uncinocarpus reesii UREG_03156 N 0.713
CIMG_02600 Coccidioides immitis CIMG_02600 N 0.713
Aqu1.212443 Amphimedon queenslandica Aqu1.212443 I 0.713
An15g00100 Aspergillus niger CADANGAG00011688 N 0.708
Pc12g04780 Penicillium chrysogenum Pc12g04780 N 0.708
NFIA_051760 Neosartorya fischeri CADNFIAG00005042 N 0.708
AFUA_6G05180 Aspergillus fumigatus CADAFUAG00000741 N 0.708
ACLA_095350 Aspergillus clavatus CADACLAG00009128 N 0.708
sap-49 Caenorhabditis elegans C08B11.5 D 0.706
CRE01639 Caenorhabditis remanei CRE01639 I 0.706
CBN06124 Caenorhabditis brenneri CBN06124 I 0.706
estExt_Genewise1Plus.C_150062 Mycosphaerella fijiensis estExt_Genewise1Plus.C_150062 N 0.706
e_gw1.00735.103.1 Aspergillus carbonarius e_gw1.00735.103.1 N 0.701