Medtr4g080070 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr4g080070 T54511_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr4g080070.1 RRM 328 406

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK08517.1 Cannabis sativa PK08517.1 N 0.848
cassava802.valid.m1 Manihot esculenta cassava802.valid.m1 N 0.848
Cucsa.051650 Cucumis sativus Cucsa.051650 N 0.873
Glyma11g15670.1 Glycine max Glyma11g15670.1 N 0.911
Glyma12g07790.1 Glycine max Glyma12g07790.1 N 0.886
Glyma13g40460.1 Glycine max Glyma13g40460.1 N 0.886
Glyma15g04950.1 Glycine max Glyma15g04950.1 N 0.899
mgf016286m Mimulus guttatus mgf016286m N 0.797
mgf016475m Mimulus guttatus mgf016475m N 0.734
Medtr2g111500 Medicago truncatula Medtr2g111500 N 0.911
LjT39B13.150.nc Lotus japonicus LjT39B13.150.nc N 0.899
MDP0000296717 Malus x domestica MDP0000296717 N 0.873
cassava801.valid.m1 Manihot esculenta cassava801.valid.m1 N 0.848
cassava13567.valid.m1 Manihot esculenta cassava13567.valid.m1 N 0.848
cassava12926.valid.m1 Manihot esculenta cassava12926.valid.m1 N 0.722
AT2G28540 Arabidopsis thaliana AT2G28540-TAIR-G N 0.759
AT3G45630 Arabidopsis thaliana AT3G45630-TAIR-G N 0.823
AT5G60170 Arabidopsis thaliana AT5G60170-TAIR-G N 0.835
XM_002864625.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002022 N 0.835
XM_002879117.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4000699 N 0.772
XM_002877379.1 Arabidopsis lyrata fgenesh2_kg.5__939__AT3G45630.1 N 0.810
GSVIVG00025102001 Vitis vinifera GSVIVG00025102001 N 0.861
B9MT79_POPTR Populus trichocarpa POPTR_0006s13450 N 0.709
B9HPP2_POPTR Populus trichocarpa POPTR_0009s03130 N 0.886
B9IIZ2_POPTR Populus trichocarpa POPTR_0016s08560 N 0.722
cassava12925.valid.m1 Manihot esculenta cassava12925.valid.m1 N 0.722
ppa000664m Prunus persica ppa000664m N 0.873