mgf016475m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf016475m T53758_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf016475m RRM 112 190

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma11g15670.1 Glycine max Glyma11g15670.1 N 0.785
mgf016286m Mimulus guttatus mgf016286m N 0.785
cassava802.valid.m1 Manihot esculenta cassava802.valid.m1 N 0.772
Glyma12g07790.1 Glycine max Glyma12g07790.1 N 0.772
cassava801.valid.m1 Manihot esculenta cassava801.valid.m1 N 0.772
GSVIVG00025102001 Vitis vinifera GSVIVG00025102001 N 0.772
LjT39B13.150.nc Lotus japonicus LjT39B13.150.nc N 0.772
Medtr2g111500 Medicago truncatula Medtr2g111500 N 0.759
PK08517.1 Cannabis sativa PK08517.1 N 0.759
ppa000664m Prunus persica ppa000664m N 0.759
B9MT79_POPTR Populus trichocarpa POPTR_0006s13450 N 0.747
B9HPP2_POPTR Populus trichocarpa POPTR_0009s03130 N 0.747
MDP0000296717 Malus x domestica MDP0000296717 N 0.747
Cucsa.051650 Cucumis sativus Cucsa.051650 N 0.747
AT3G45630 Arabidopsis thaliana AT3G45630-TAIR-G N 0.747
cassava13567.valid.m1 Manihot esculenta cassava13567.valid.m1 N 0.747
Glyma15g04950.1 Glycine max Glyma15g04950.1 N 0.747
Glyma13g40460.1 Glycine max Glyma13g40460.1 N 0.747
Medtr4g080070 Medicago truncatula Medtr4g080070 N 0.734
B9IIZ2_POPTR Populus trichocarpa POPTR_0016s08560 N 0.734
cassava12926.valid.m1 Manihot esculenta cassava12926.valid.m1 N 0.734
XM_002877379.1 Arabidopsis lyrata fgenesh2_kg.5__939__AT3G45630.1 N 0.734
cassava12925.valid.m1 Manihot esculenta cassava12925.valid.m1 N 0.734
AT5G60170 Arabidopsis thaliana AT5G60170-TAIR-G N 0.722
XM_002864625.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002022 N 0.722
MDP0000213471 Malus x domestica MDP0000213471 N 0.722
AT2G28540 Arabidopsis thaliana AT2G28540-TAIR-G N 0.709
XM_002879117.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4000699 N 0.709