CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSPATP00026936001
(
Paramecium tetraurelia
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GSPATP00026936001
T56850_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSPATP00026936001
RRM
31
101
IFIANLNYAMNEGDIAIVFSQYGEIVDVHLVRDKITGKSKGFCFLAYEDQRSTILAVDNFNHAEICGRLLR
Links
Other
RRM
family RBPs
Other
Paramecium tetraurelia
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.704
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.718
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.704
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.704
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.704
3703.m00181
Tetrahymena thermophila
3703.m00181
N
0.704