CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBMX2
(
Takifugu rubripes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTRUG00000001699
T42202_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000003896
RRM
38
108
VFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIR
ENSTRUP00000003897
RRM
38
108
VFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIR
ENSTRUP00000003898
RRM
38
108
VFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Takifugu rubripes
RBPs
102 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.986
rbmx2
Danio rerio
ENSDARG00000044380
N
0.972
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.930
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.917
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.917
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.917
RBMX2
Homo sapiens
ENSG00000134597
N
0.917
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.917
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.917
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.917
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.917
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.917
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.917
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.917
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.917
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.917
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.915
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.903
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.903
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.903
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.903
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.903
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.903
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.903
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.901
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.892
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.889
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.889
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.889
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.889
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.889
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.887
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.878
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.877
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.875
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.875
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.875
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.875
GJ13600
Drosophila virilis
FBgn0200822
N
0.873
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.873
GI11259
Drosophila mojavensis
FBgn0134020
N
0.859
GI11260
Drosophila mojavensis
FBgn0134021
N
0.859
GI20215
Drosophila mojavensis
FBgn0142951
N
0.859
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.859
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.859
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.847
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.845
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.845
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.845
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.845
GL26176
Drosophila persimilis
FBgn0163758
N
0.845
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.838
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.831
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.831
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.831
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.817
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.817
GK14925
Drosophila willistoni
FBgn0216930
N
0.817
GF14433
Drosophila ananassae
FBgn0091460
N
0.817
GH13830
Drosophila grimshawi
FBgn0121306
N
0.817
PHUM617480
Pediculus humanus
PHUM617480
N
0.817
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.817
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.817
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.817
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.817
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.806
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.803
GG21207
Drosophila erecta
FBgn0113387
N
0.803
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.797
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.792
CG10466
Drosophila melanogaster
FBgn0032822
N
0.789
GD24233
Drosophila simulans
FBgn0195582
N
0.789
GE13281
Drosophila yakuba
FBgn0230967
N
0.789
GM17378
Drosophila sechellia
FBgn0172288
N
0.789
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.775
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.775
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.775
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.775
Bm1_02690
Brugia malayi
Bm1_02690
N
0.775
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.775
AGAP000977
Anopheles gambiae
AGAP000977
N
0.761
AAEL002461
Aedes aegypti
AAEL002461
N
0.761
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.746
145168
Helobdella robusta
145168
N
0.746
C30B5.4
Caenorhabditis elegans
C30B5.4
N
0.746
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.732
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.732
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.732
GSTUMT00000089001
Tuber melanosporum
GSTUMT00000089001
N
0.732
AAH56844
Xenopus laevis
AAH56844
N
0.730
CRE26315
Caenorhabditis remanei
CRE26315
N
0.718
ENSCING00000015467
Ciona intestinalis
ENSCING00000015467
N
0.718
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.718
CBN24057
Caenorhabditis brenneri
CBN24057
N
0.718
gw1.1.3012.1
Tremella mesenterica
gw1.1.3012.1
N
0.718
ISCW009356
Ixodes scapularis
ISCW009356
N
0.718
SPPG_01752
Spizellomyces punctatus
SPPG_01752
N
0.716
GSPATP00026936001
Paramecium tetraurelia
GSPATP00026936001
N
0.704
PABG_03870
Paracoccidioides brasiliensis
PABG_03870
N
0.704
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.703
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.703