PDK_20s1386251g001 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1386251g001 T58120_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1386251g001 RRM 536 601

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK10346.1 Cannabis sativa PK10346.1 N 0.742
cassava23957.valid.m1 Manihot esculenta cassava23957.valid.m1 N 0.758
cassava25979.m1 Manihot esculenta cassava25979.m1 N 0.742
Cucsa.017340 Cucumis sativus Cucsa.017340 N 0.731
Cucsa.334810 Cucumis sativus Cucsa.334810 N 0.742
Glyma16g04290.1 Glycine max Glyma16g04290.1 N 0.731
GRMZM2G172011 Zea mays GRMZM2G172011 N 0.750
MDP0000120510 Malus x domestica MDP0000120510 N 0.701
ppa009644m Prunus persica ppa009644m N 0.712
cassava22592.valid.m1 Manihot esculenta cassava22592.valid.m1 N 0.742
cassava22591.valid.m1 Manihot esculenta cassava22591.valid.m1 N 0.742
AT5G32450 Arabidopsis thaliana AT5G32450-TAIR-G N 0.791
BRADI1G08597 Brachypodium distachyon BRADI1G08597 N 0.721
XM_002868345.1 Arabidopsis lyrata fgenesh2_kg.7__3000__AT5G32450.1 N 0.791
GSVIVG00022464001 Vitis vinifera GSVIVG00022464001 N 0.821
LOC_Os03g53770 Oryza sativa LOC_Os03g53770 N 0.750
B9I5V6_POPTR Populus trichocarpa POPTR_0013s05190 N 0.727
SB01G008070 Sorghum bicolor Sb01g008070 N 0.750
30072.m000978 Ricinus communis 30072.m000978 N 0.706
ppa009902m Prunus persica ppa009902m N 0.712