SAKL0C12672g (Lachancea kluyveri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SAKL0C12672g T58559_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HRP1
M030_0.6 		Saccharomyces cerevisiae UAYRUAV RNAcompete
Ray et al.(2013)
RNCMPT00031 		0.863
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
SAKL0C12672g RRM 184 252
SAKL0C12672g RRM 268 337

Links

Other RRM family RBPs
Other Lachancea kluyveri RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HRP1 Saccharomyces cerevisiae YOL123W D 0.863
ZYRO0C02574g Zygosaccharomyces rouxii ZYRO0C02574g I 0.892
Kwal_21960 Kluyveromyces waltii Kwal_21960 I 0.964
KLTH0F18766g Kluyveromyces thermotolerans KLTH0F18766g I 0.964
KLLA0C12925g Kluyveromyces lactis KLLA0C12925g I 0.906
CAGL0M03795g Candida glabrata CAGL0M03795g I 0.806
CAGL0E01947g Candida glabrata CAGL0E01947g I 0.892
ADL160W Ashbya gossypii ADL160W I 0.906
A7TSG2_VANPO Vanderwaltozyma polyspora A7TSG2_VANPO I 0.871
22111_YOL123W Saccharomyces bayanus 22111_YOL123W I 0.863
19853_YOL123W Saccharomyces paradoxus 19853_YOL123W I 0.863
19782_YOL123W Saccharomyces mikatae 19782_YOL123W I 0.863
Scas_Contig635.7 Saccharomyces castellii Scas_Contig635.7 I 0.863
estExt_fgenesh1_pg.C_chr_8.10049 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10049 N 0.719
LELG_02873 Lodderomyces elongisporus LELG_02873 N 0.705
DEHA0F18139g Debaryomyces hansenii DEHA0F18139g N 0.719
XP_002490478.1 Pichia pastoris XP_002490478.1 N 0.712
CPAG_05112 Candida parapsilosis CPAG_05112 N 0.712