19853_YOL123W (Saccharomyces paradoxus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 19853_YOL123W T55160_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HRP1
M030_0.6 		Saccharomyces cerevisiae UAYRUAV RNAcompete
Ray et al.(2013)
RNCMPT00031 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
19853_YOL123W RRM 162 230
19853_YOL123W RRM 246 315

Links

Other RRM family RBPs
Other Saccharomyces paradoxus RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HRP1 Saccharomyces cerevisiae YOL123W D 1.000
19782_YOL123W Saccharomyces mikatae 19782_YOL123W I 1.000
22111_YOL123W Saccharomyces bayanus 22111_YOL123W I 1.000
CAGL0E01947g Candida glabrata CAGL0E01947g I 0.878
ZYRO0C02574g Zygosaccharomyces rouxii ZYRO0C02574g I 0.871
SAKL0C12672g Lachancea kluyveri SAKL0C12672g I 0.863
Kwal_21960 Kluyveromyces waltii Kwal_21960 I 0.856
KLTH0F18766g Kluyveromyces thermotolerans KLTH0F18766g I 0.856
ADL160W Ashbya gossypii ADL160W I 0.856
Scas_Contig635.7 Saccharomyces castellii Scas_Contig635.7 I 0.842
KLLA0C12925g Kluyveromyces lactis KLLA0C12925g I 0.842
A7TSG2_VANPO Vanderwaltozyma polyspora A7TSG2_VANPO I 0.827
CAGL0M03795g Candida glabrata CAGL0M03795g I 0.813