PGTG_13830 (Puccinia graminis)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 PGTG_13830 T59962_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_13830 S1 5 70

Links

Other S1 family RBPs
Other Puccinia graminis RBPs

207 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
eIF-2alpha Drosophila melanogaster FBgn0261609 D 0.737
estExt_GenewiseH_1.C_750056 Nematostella vectensis estExt_GenewiseH_1.C_750056 I 0.763
estExt_fgenesh2_pm.C_5760005 Branchiostoma floridae estExt_fgenesh2_pm.C_5760005 I 0.760
estExt_fgenesh2_pm.C_1660010 Branchiostoma floridae estExt_fgenesh2_pm.C_1660010 I 0.760
estExt_fgenesh2_pg.C_150109 Monosiga brevicollis estExt_fgenesh2_pg.C_150109 I 0.760
estExt_fgenesh2_kg.C_40048 Neurospora tetrasperma estExt_fgenesh2_kg.C_40048 I 0.816
estExt_fgenesh2_kg.C_20112 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_20112 I 0.737
estExt_fgenesh1_pm.C_chr_100036 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_100036 I 0.829
estExt_fgenesh1_pm.C_210071 Selaginella moellendorfii estExt_fgenesh1_pm.C_210071 I 0.720
estExt_fgenesh1_pg.C_210136 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_210136 I 0.816
estExt_fgenesh1_pg.C_20141 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_20141 I 0.829
estExt_fgenesh1_kg.C_70012 Micromonas pusilla estExt_fgenesh1_kg.C_70012 I 0.707
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.733
estExt_fgenesh3_kg.C_30291 Neurospora discreta estExt_fgenesh3_kg.C_30291 I 0.816
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.711
estExt_Genewise1Plus.C_sca_18_chr2_1_00859 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00859 I 0.829
estExt_Genewise1Plus.C_2350006 Capitella teleta estExt_Genewise1Plus.C_2350006 I 0.733
estExt_Genewise1Plus.C_230113 Phycomyces blakesleeanus estExt_Genewise1Plus.C_230113 I 0.747
estExt_Genewise1Plus.C_10999 Thielavia terrestris estExt_Genewise1Plus.C_10999 I 0.816
estExt_Genewise1.C_51162 Mucor circinelloides estExt_Genewise1.C_51162 I 0.747
estExt_Genewise1.C_30452 Schizophyllum commune estExt_Genewise1.C_30452 I 0.789
estExt_Genewise1.C_21511 Trichoderma virens estExt_Genewise1.C_21511 I 0.829
estExt_Genewise1.C_10111 Trichoderma reesei estExt_Genewise1.C_10111 I 0.829
estExt_Genewise1.C_100430 Trichoderma atroviride estExt_Genewise1.C_100430 I 0.829
estExt_Genewise1.C_100122 Postia placenta estExt_Genewise1.C_100122 I 0.816
estExt_fgenesh1_kg.C_130002 Sporobolomyces roseus estExt_fgenesh1_kg.C_130002 I 0.867
estExt_fgenesh1_kg.C_10157 Myceliophthora thermophila estExt_fgenesh1_kg.C_10157 I 0.816
PHATRDRAFT_34538 Phaeodactylum tricornutum Phatr34538 I 0.724
NCU08277 Neurospora crassa NCU08277 I 0.816
ISCW017360 Ixodes scapularis ISCW017360 I 0.750
GE15968 Drosophila yakuba FBgn0233524 I 0.737
GK25248 Drosophila willistoni FBgn0227207 I 0.737
GJ19141 Drosophila virilis FBgn0206286 I 0.737
GD15749 Drosophila simulans FBgn0187410 I 0.737
GM13399 Drosophila sechellia FBgn0168330 I 0.737
GL20268 Drosophila persimilis FBgn0157863 I 0.737
GI21763 Drosophila mojavensis FBgn0144493 I 0.737
PHUM551010 Pediculus humanus PHUM551010 I 0.724
tif211 Schizosaccharomyces pombe SPAC3G9.09c I 0.813
THAPSDRAFT_105 Thalassiosira pseudonana Thaps105 I 0.711
e_gww2.12.213.1 Phanerochaete chrysosporium e_gww2.12.213.1 I 0.816
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.711
e_gwh1.12.106.1 Laccaria bicolor e_gwh1.12.106.1 I 0.789
e_gw1.7.228.1 Trichoplax adhaerens e_gw1.7.228.1 I 0.747
e_gw1.2.367.1 Ostreococcus RCC809 e_gw1.2.367.1 I 0.757
e_gw.114.57.1 Nematostella vectensis e_gw.114.57.1 I 0.763
72304 Aureococcus anophagefferens 72304 I 0.760
69770 Aureococcus anophagefferens 69770 I 0.760
114622 Helobdella robusta 114622 I 0.733
SUI2 Saccharomyces cerevisiae YJR007W I 0.789
GG19321 Drosophila erecta FBgn0111525 I 0.737
estExt_gwp_gw1.C_3520018 Physcomitrella patens estExt_gwp_gw1.C_3520018 I 0.711
Q7ZTK4 Xenopus laevis Q7ZTK4 I 0.747
KLTH0B02002g Kluyveromyces thermotolerans KLTH0B02002g I 0.816
KLLA0A11814g Kluyveromyces lactis KLLA0A11814g I 0.800
GSTUMT00002346001 Tuber melanosporum GSTUMT00002346001 I 0.816
genemark.2222_g Pleurotus ostreatus genemark.2222_g I 0.816
fgenesh1_pm.00077_#_3 Aspergillus carbonarius fgenesh1_pm.00077_#_3 I 0.803
estExt_Genewise1Plus.C_80350 Agaricus bisporus estExt_Genewise1Plus.C_80350 I 0.776
estExt_Genewise1.C_110295 Coccomyxa C 169 estExt_Genewise1.C_110295 I 0.711
estExt_Genewise1.C_100332 Chlorella vulgaris estExt_Genewise1.C_100332 I 0.711
estExt_fgenesh2_pm.C_120283 Heterobasidion annosum estExt_fgenesh2_pm.C_120283 I 0.816
estExt_fgenesh2_kg.C_21286 Serpula lacrymans estExt_fgenesh2_kg.C_21286 I 0.803
Kwal_15422 Kluyveromyces waltii Kwal_15422 I 0.816
Pa_6_5980 Podospora anserina Pa_6_5980 I 0.816
PMAA_021520 Penicillium marneffei PMAA_021520 I 0.816
AAH46576 Xenopus laevis AAH46576 I 0.747
ZYRO0G12056g Zygosaccharomyces rouxii ZYRO0G12056g I 0.803
YALI0B01034g Yarrowia lipolytica YALI0B01034g I 0.737
XP_801812.1 Strongylocentrotus purpuratus XP_801812.1 I 0.707
XP_779939.1 Strongylocentrotus purpuratus XP_779939.1 I 0.707
XP_002492289.1 Pichia pastoris XP_002492289.1 I 0.803
XP_002156465.1 Hydra magnipapillata XP_002156465.1 I 0.760
XP_001176396.1 Strongylocentrotus purpuratus XP_001176396.1 I 0.707
XP_001176254.1 Strongylocentrotus purpuratus XP_001176254.1 I 0.707
SAKL0G14058g Lachancea kluyveri SAKL0G14058g I 0.803
estExt_fgenesh1_pg.C_Chr_02.00010078 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_02.00010078 I 0.707
estExt_fgenesh1_pg.C_210283 Phytophthora capsici estExt_fgenesh1_pg.C_210283 I 0.838
e_gw1.3.2112.1 Cryphonectria parasitica e_gw1.3.2112.1 I 0.816
Scas_Contig617.9 Saccharomyces castellii Scas_Contig617.9 I 0.800
Scas_Contig479.2 Saccharomyces castellii Scas_Contig479.2 I 0.800
PredSwiss_EST393.1 Pneumocystis carinii PredSwiss_EST393.1 I 0.816
EAT79164.1 Phaeosphaeria nodorum EAT79164.1 I 0.816
PASA_GEN_0500123 Daphnia pulex PASA_GEN_0500123 I 0.737
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.707
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 Emiliania huxleyi fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 I 0.720
fgenesh1_pm.C_scaffold_69000005 Phytophthora ramorum fgenesh1_pm.C_scaffold_69000005 I 0.760
fgenesh1_pm.C_scaffold_10000060 Batrachochytrium dendrobatidis fgenesh1_pm.C_scaffold_10000060 I 0.803
fgenesh1_pg.scaffold_55000187 Physcomitrella patens fgenesh1_pg.scaffold_55000187 I 0.711
Skud_Contig1955.10 Saccharomyces kudriavzevii Skud_Contig1955.10 I 0.789
BGIBMGA004302 Bombyx mori BGIBMGA004302 I 0.737
12209_YJR007W Saccharomyces mikatae 12209_YJR007W I 0.789
e_gw1.18.114.1 Tremella mesenterica e_gw1.18.114.1 I 0.763
EDP42051.1 Malassezia globosa EDP42051.1 I 0.789
Cd36_06510 Candida dubliniensis Cd36_06510 I 0.763
CAGL0B03795g Candida glabrata CAGL0B03795g I 0.789
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.760
AGR320W Ashbya gossypii AGR320W I 0.789
AB05699.1 Alternaria brassicicola AB05699.1 I 0.816
A7TIH9_VANPO Vanderwaltozyma polyspora A7TIH9_VANPO I 0.803
13294_YJR007W Saccharomyces bayanus 13294_YJR007W I 0.789
12331_YJR007W Saccharomyces paradoxus 12331_YJR007W I 0.789
fgenesh1_pg.C_scaffold_2000543 Melampsora laricis populina fgenesh1_pg.C_scaffold_2000543 I 0.853
GF19374 Drosophila ananassae FBgn0096384 I 0.737
nasonia_NCBI_hmm338664 Nasonia vitripennis nasonia_NCBI_hmm338664 I 0.737
SPOG_03916 Schizosaccharomyces cryophilus SPOG_03916 I 0.813
SOCG_01617 Schizosaccharomyces octosporus SOCG_01617 I 0.813
SNOG_13280 Stagonospora nodorum SNOG_13280 I 0.816
SJAG_03629 Schizosaccharomyces japonicus SJAG_03629 I 0.813
RO3G_13185 Rhizopus oryzae RO3G_13185 I 0.747
RO3G_12494 Rhizopus oryzae RO3G_12494 I 0.747
PTRG_05239 Pyrenophora tritici repentis PTRG_05239 I 0.816
PITG_07885 Phytophthora infestans PITG_07885 I 0.760
PGUG_00485 Candida guilliermondii PGUG_00485 I 0.763
SUI2 Candida albicans orf19.6213 I 0.763
SPPG_00622 Spizellomyces punctatus SPPG_00622 I 0.813
SS1G_13048 Sclerotinia sclerotiorum SS1G_13048 I 0.797
TEQG_01370 Trichophyton equinum TEQG_01370 I 0.827
DGIL_AUG5s12507g4t1 Acyrtosiphon pisum DGIL_AUG5s12507g4t1 I 0.724
amel4_ncbi_hmm23817 Apis mellifera amel4_ncbi_hmm23817 I 0.737
WUBG_12485 Wuchereria bancrofti WUBG_12485 I 0.760
VDBG_01622 Verticillium albo atrum VDBG_01622 I 0.829
VDAG_01930 Verticillium dahliae VDAG_01930 I 0.829
UREG_00217 Uncinocarpus reesii UREG_00217 I 0.816
UM01463 Ustilago maydis UM01463 I 0.789
TRV_03711 Trichophyton verrucosum TRV_03711 I 0.827
TESG_05324 Trichophyton tonsurans TESG_05324 I 0.827
TERG_00559 Trichophyton rubrum TERG_00559 I 0.827
MGYG_00686 Microsporum gypseum MGYG_00686 I 0.827
MGG_13200 Magnaporthe oryzae MGG_13200 I 0.803
MCYG_00123 Microsporum canis MCYG_00123 I 0.827
CIMG_00109 Coccidioides immitis CIMG_00109 I 0.816
CHGG_04762 Chaetomium globosum CHGG_04762 I 0.816
CC1G_08524 Coprinopsis cinerea CC1G_08524 I 0.789
CAOG_02542 Capsaspora owczarzaki CAOG_02542 I 0.701
Bm1_04900 Brugia malayi Bm1_04900 I 0.760
BDBG_06604 Blastomyces dermatitidis BDBG_06604 I 0.829
BC1G_14334 Botrytis cinerea BC1G_14334 I 0.829
ARB_05709 Arthroderma benhamiae ARB_05709 I 0.827
AMSG_04936 Thecamonas trahens AMSG_04936 I 0.747
AMAG_04113 Allomyces macrogynus AMAG_04113 I 0.760
CLUG_04130 Candida lusitaniae CLUG_04130 I 0.776
CPAG_01889 Candida parapsilosis CPAG_01889 I 0.776
CpipJ_CPIJ011194 Culex pipiens CpipJ_CPIJ011194 I 0.724
LOAG_09556 Loa loa LOAG_09556 I 0.760
LELG_00811 Lodderomyces elongisporus LELG_00811 I 0.776
HCAG_01136 Histoplasma capsulatum HCAG_01136 I 0.840
GLRG_02833 Colletotrichum graminicola GLRG_02833 I 0.829
FVEG_06185 Fusarium verticillioides FVEG_06185 I 0.829
FOXG_08491 Fusarium oxysporum FOXG_08491 I 0.829
FGSG_06220 Fusarium graminearum FGSG_06220 I 0.816
DEHA0F26235g Debaryomyces hansenii DEHA0F26235g I 0.776
CTRG_04191 Candida tropicalis CTRG_04191 I 0.776
CPSG_04829 Coccidioides posadasii CPSG_04829 I 0.816
AMAG_01618 Allomyces macrogynus AMAG_01618 I 0.760
AAEL013675 Aedes aegypti AAEL013675 I 0.711
GA22144-RA Drosophila pseudoobscura FBgn0082124 I 0.737
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.760
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.760
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.760
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.760
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.760
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.760
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.760
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.760
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.760
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.760
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.760
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.760
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.760
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.760
EIF2S1 Tarsius syrichta ENSTSYG00000014171 I 0.750
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.760
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.760
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.760
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.760
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.760
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.760
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.760
EIF2S1 Pteropus vampyrus ENSPVAG00000003040 I 0.720
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.760
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.760
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.760
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.760
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.760
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.760
CPIJ011194 Culex quinquefasciatus CPIJ011194 I 0.724
NFIA_063860 Neosartorya fischeri CADNFIAG00005762 I 0.803
ATEG_04051 Aspergillus terreus CADATEAG00009463 I 0.803
ANIA_03156 Aspergillus nidulans CADANIAG00009914 I 0.803
AFUA_3G13480 Aspergillus fumigatus CADAFUAG00005171 I 0.782
AFLA_020350 Aspergillus flavus CADAFLAG00003920 I 0.803
ACLA_041660 Aspergillus clavatus CADACLAG00004024 I 0.803
ENSCHOG00000003744 Choloepus hoffmanni ENSCHOG00000003744 I 0.733
ENSCHOG00000004230 Choloepus hoffmanni ENSCHOG00000004230 I 0.733
EIF2S1 Homo sapiens ENSG00000134001 I 0.760
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.760
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.760
LOC100052709 Equus caballus ENSECAG00000018424 I 0.760
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.760
eif2s1 Danio rerio ENSDARG00000052178 I 0.760
eif2s1l Danio rerio ENSDARG00000005827 I 0.760
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.760
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.760
ENSCHOG00000009030 Choloepus hoffmanni ENSCHOG00000009030 I 0.747
AGAP011190 Anopheles gambiae AGAP011190 I 0.724
AO090012000783 Aspergillus oryzae CADAORAG00006316 N 0.737