27613.m000645 (Ricinus communis)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		27613.m000645 T00814_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
27613.m000645 CCCH ZF 190 214
27613.m000645 RRM 351 411

Links

Other CCCH ZF,RRM family RBPs
Other Ricinus communis RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29223.m000023 Ricinus communis 29223.m000023 N 0.791
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.816
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.885
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.885
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.884
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.000
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.736
MDP0000214614 Malus x domestica MDP0000214614 N 0.814
MDP0000906147 Malus x domestica MDP0000906147 N 0.793
Medtr3g077080 Medicago truncatula Medtr3g077080 N 0.000
PK01281.1 Cannabis sativa PK01281.1 N 0.814
ppa003564m Prunus persica ppa003564m N 0.814
ppa019338m Prunus persica ppa019338m N 0.828