CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LELG_01192
(
Lodderomyces elongisporus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
LELG_01192
T01416_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LELT_01192
CCCH ZF
126
152
FQPDVCKDFLQTGYCGYGDTCKFLHVR
Links
Other
CCCH ZF
family RBPs
Other
Lodderomyces elongisporus
RBPs
132 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG1218
Drosophila melanogaster
FBgn0037377
N
0.000
GA11459-RA
Drosophila pseudoobscura
FBgn0071510
N
0.000
GD19822
Drosophila simulans
FBgn0191311
N
0.000
GE10166
Drosophila yakuba
FBgn0228044
N
0.000
GH18157
Drosophila grimshawi
FBgn0125625
N
0.000
GI10110
Drosophila mojavensis
FBgn0132876
N
0.000
GJ23331
Drosophila virilis
FBgn0210432
N
0.000
GK13433
Drosophila willistoni
FBgn0215441
N
0.000
GL24525
Drosophila persimilis
FBgn0162114
N
0.000
GM10841
Drosophila sechellia
FBgn0165787
N
0.000