VDAG_08863 (Verticillium dahliae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 VDAG_08863 T01704_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_08863T0 CCCH ZF 96 121

Links

Other CCCH ZF family RBPs
Other Verticillium dahliae RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB07703.1 Alternaria brassicicola AB07703.1 N 0.846
ACLA_016930 Aspergillus clavatus CADACLAG00000891 N 0.769
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.769
An14g05330 Aspergillus niger CADANGAG00011470 N 0.731
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.808
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.769
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.731
BDBG_01641 Blastomyces dermatitidis BDBG_01641 N 0.769
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.731
CC1G_07829 Coprinopsis cinerea CC1G_07829 N 0.731
CHGG_07887 Chaetomium globosum CHGG_07887 N 0.885
CIMG_09790 Coccidioides immitis CIMG_09790 N 0.846
CPSG_09723 Coccidioides posadasii CPSG_09723 N 0.846
estExt_fgenesh1_pg.C_40101 Trichoderma atroviride estExt_fgenesh1_pg.C_40101 N 0.808
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.846
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.923
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.846
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.923
estExt_Genewise1.C_210247 Trichoderma reesei estExt_Genewise1.C_210247 N 0.808
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.846
estExt_Genewise1.C_30385 Mucor circinelloides estExt_Genewise1.C_30385 N 0.731
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.846
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.808
estExt_Genewise1Plus.C_sca_12_chr5_2_00446 Nectria haematococca estExt_Genewise1Plus.C_sca_12_chr5_2_00446 N 0.808
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.731
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.731
gw1.23.236.1 Trichoderma virens gw1.23.236.1 N 0.808
HCAG_08348 Histoplasma capsulatum HCAG_08348 N 0.769
MCYG_02954 Microsporum canis MCYG_02954 N 0.808
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.885
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.808
NCU01795 Neurospora crassa NCU01795 N 0.923
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.769
PABG_07629 Paracoccidioides brasiliensis PABG_07629 N 0.808
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.885
Pc21g03130 Penicillium chrysogenum Pc21g03130 N 0.769
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.769
Scas_Contig578.9 Saccharomyces castellii Scas_Contig578.9 N 0.731
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.731
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.808
TERG_01412 Trichophyton rubrum TERG_01412 N 0.808
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.808
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.808
UREG_04706 Uncinocarpus reesii UREG_04706 N 0.808
VDBG_05241 Verticillium albo atrum VDBG_05241 N 1.000