Glyma17g08630.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma17g08630.1 T52892_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma17g08630.1 RRM 44 114

Links

Other RRM family RBPs
Other Glycine max RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 1.000
ppa010113m Prunus persica ppa010113m N 0.859
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.859
MDP0000635271 Malus x domestica MDP0000635271 N 0.845
PK15111.1 Cannabis sativa PK15111.1 N 0.845
MDP0000302917 Malus x domestica MDP0000302917 N 0.817
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.817
MDP0000255642 Malus x domestica MDP0000255642 N 0.817
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.817
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.817
mgf014059m Mimulus guttatus mgf014059m N 0.803
mgf012875m Mimulus guttatus mgf012875m N 0.803
mgf016144m Mimulus guttatus mgf016144m N 0.803
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.803
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.803
XM_002887486.1 Arabidopsis lyrata fgenesh2_kg.2__1690__AT1G74230.1 N 0.789
GR-RBP5 Arabidopsis thaliana AT1G74230-TAIR-G N 0.789
30138.m003973 Ricinus communis 30138.m003973 N 0.775
GR-RBP3 Arabidopsis thaliana AT5G61030-TAIR-G N 0.775
mgf007732m Mimulus guttatus mgf007732m N 0.775
Medtr3g036670 Medicago truncatula Medtr3g036670 N 0.775
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.775
LjT12A09.50.nd Lotus japonicus LjT12A09.50.nd N 0.761
A9PIG6_POPTR Populus trichocarpa POPTR_0015s06810 N 0.761
XM_002864670.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002097 N 0.761
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.732
Glyma08g26900.1 Glycine max Glyma08g26900.1 N 0.732
LOC_Os12g31800 Oryza sativa LOC_Os12g31800 N 0.732
chr4.CM0500.260.nd Lotus japonicus chr4.CM0500.260.nd N 0.732
BGIOSIBCE036678 Oryza indica BGIOSIBCE036678 N 0.732
Glyma18g50150.1 Glycine max Glyma18g50150.1 N 0.718
BRADI3G24720 Brachypodium distachyon BRADI3G24720 N 0.718
chr1.CM0410.300.nd Lotus japonicus chr1.CM0410.300.nd N 0.718
SB08G015580 Sorghum bicolor Sb08g015580 N 0.704
GRMZM2G150521 Zea mays GRMZM2G150521 N 0.704