MBNL3 (Ornithorhynchus anatinus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSOANG00000011697 T03030_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.913
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.913
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000018536 CCCH ZF 1 14
ENSOANP00000018536 CCCH ZF 119 145
ENSOANP00000018536 CCCH ZF 156 179
ENSOANP00000018537 CCCH ZF 16 40
ENSOANP00000018537 CCCH ZF 57 72
ENSOANP00000018537 CCCH ZF 177 203
ENSOANP00000018537 CCCH ZF 214 237

Links

Other CCCH ZF family RBPs
Other Ornithorhynchus anatinus RBPs

129 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL003401 Aedes aegypti AAEL003401 N 0.000
amel4_ncbi_hmm13760 Apis mellifera amel4_ncbi_hmm13760 N 0.000
amel4_ncbi_hmm13760 Tribolium castaneum amel4_ncbi_hmm13760 N 0.000
CPIJ001219 Culex quinquefasciatus CPIJ001219 N 0.000
CpipJ_CPIJ001219 Culex pipiens CpipJ_CPIJ001219 N 0.000
ENSCSAVG00000002667 Ciona savignyi ENSCSAVG00000002667 N 0.000
estExt_Genewise1Plus.C_sca_120103 Lottia gigantea estExt_Genewise1Plus.C_sca_120103 N 0.000
nasonia_NCBI_hmm304924 Nasonia vitripennis nasonia_NCBI_hmm304924 N 0.000
PHUM079870 Pediculus humanus PHUM079870 N 0.000
XP_001175504.1 Strongylocentrotus purpuratus XP_001175504.1 N 0.000
XP_001175728.1 Strongylocentrotus purpuratus XP_001175728.1 N 0.000
XP_001176876.1 Strongylocentrotus purpuratus XP_001176876.1 N 0.000
XP_780458.1 Strongylocentrotus purpuratus XP_780458.1 N 0.000