amel4_ncbi_hmm13760 (Apis mellifera)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 amel4_ncbi_hmm13760 T60096_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm13760 S1 74 155

Links

Other S1 family RBPs
Other Apis mellifera RBPs

68 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm13760 Tribolium castaneum amel4_ncbi_hmm13760 N 1.000
nasonia_NCBI_hmm304924 Nasonia vitripennis nasonia_NCBI_hmm304924 N 0.927
PHUM079870 Pediculus humanus PHUM079870 N 0.915
CpipJ_CPIJ001219 Culex pipiens CpipJ_CPIJ001219 N 0.890
CPIJ001219 Culex quinquefasciatus CPIJ001219 N 0.890
GH18755 Drosophila grimshawi FBgn0126222 N 0.866
GG20814 Drosophila erecta FBgn0113000 N 0.866
GJ23373 Drosophila virilis FBgn0210474 N 0.866
GA16051-RA Drosophila pseudoobscura FBgn0076067 N 0.866
GA27654-RA Drosophila pseudoobscura FBgn0249019 N 0.866
Rpb7 Drosophila melanogaster FBgn0051155 N 0.866
GK11212 Drosophila willistoni FBgn0213223 N 0.866
GM25797 Drosophila sechellia FBgn0180653 N 0.866
GI22645 Drosophila mojavensis FBgn0145373 N 0.866
AAEL003401 Aedes aegypti AAEL003401 N 0.866
GD20374 Drosophila simulans FBgn0191847 N 0.866
GF11824 Drosophila ananassae FBgn0088864 N 0.866
GE26402 Drosophila yakuba FBgn0243428 N 0.866
GL12210 Drosophila persimilis FBgn0149817 N 0.866
DGIL_AUG5s10638g4t1 Acyrtosiphon pisum DGIL_AUG5s10638g4t1 N 0.817
AGAP002121 Anopheles gambiae AGAP002121 N 0.805
estExt_Genewise1Plus.C_sca_120103 Lottia gigantea estExt_Genewise1Plus.C_sca_120103 N 0.786
PASA_GEN_8000031 Daphnia pulex PASA_GEN_8000031 N 0.786
XP_001175504.1 Strongylocentrotus purpuratus XP_001175504.1 N 0.786
XP_001175728.1 Strongylocentrotus purpuratus XP_001175728.1 N 0.786
XP_001176876.1 Strongylocentrotus purpuratus XP_001176876.1 N 0.786
XP_780458.1 Strongylocentrotus purpuratus XP_780458.1 N 0.786
ENSCING00000004991 Ciona intestinalis ENSCING00000004991 N 0.774
estExt_Genewise1Plus.C_2200037 Capitella teleta estExt_Genewise1Plus.C_2200037 N 0.774
XP_002157143.1 Hydra magnipapillata XP_002157143.1 N 0.762
POLR2G Anolis carolinensis ENSACAG00000001005 N 0.762
polr2g Xenopus tropicalis ENSXETG00000006022 N 0.762
polr2gl Danio rerio ENSDARG00000056127 N 0.762
AAI28969 Xenopus laevis AAI28969 N 0.762
104718 Helobdella robusta 104718 N 0.756
Ame_R013924 Ailuropoda melanoleuca Ame_R013924 N 0.750
estExt_fgenesh1_pg.C_1060040 Nematostella vectensis estExt_fgenesh1_pg.C_1060040 N 0.750
POLR2G Procavia capensis ENSPCAG00000016408 N 0.750
POLR2G Gasterosteus aculeatus ENSGACG00000017706 N 0.750
POLR2G Homo sapiens ENSG00000168002 N 0.750
POLR2G Gorilla gorilla ENSGGOG00000011739 N 0.750
POLR2G Loxodonta africana ENSLAFG00000004354 N 0.750
POLR2G Macropus eugenii ENSMEUG00000011547 N 0.750
LOC100063883 Equus caballus ENSECAG00000021465 N 0.750
Polr2g Dipodomys ordii ENSDORG00000015696 N 0.750
RPB7_BOVIN Bos taurus ENSBTAG00000009483 N 0.750
POLR2G Canis familiaris ENSCAFG00000015461 N 0.750
LOC100398629 Callithrix jacchus ENSCJAG00000018688 N 0.750
POLR2G Cavia porcellus ENSCPOG00000001153 N 0.750
ENSMLUG00000003971 Myotis lucifugus ENSMLUG00000003971 N 0.750
ENSMLUG00000011039 Myotis lucifugus ENSMLUG00000011039 N 0.750
ENSPPYG00000003147 Pongo pygmaeus ENSPPYG00000003147 N 0.750
POLR2G Pan troglodytes ENSPTRG00000003786 N 0.750
Polr2g Rattus norvegicus ENSRNOG00000019439 N 0.750
POLR2G Takifugu rubripes ENSTRUG00000002492 N 0.750
POLR2G Oryzias latipes ENSORLG00000003154 N 0.750
POLR2G Oryctolagus cuniculus ENSOCUG00000009485 N 0.750
POLR2G Macaca mulatta ENSMMUG00000014368 N 0.750
POLR2G Monodelphis domestica ENSMODG00000007984 N 0.750
Polr2g Mus musculus ENSMUSG00000071662 N 0.750
POLR2G Ornithorhynchus anatinus ENSOANG00000005808 N 0.750
POLR2G Tursiops truncatus ENSTTRG00000002478 N 0.750
POLR2G Pteropus vampyrus ENSPVAG00000003481 N 0.738
POLR2G Microcebus murinus ENSMICG00000009967 N 0.738
estExt_gwp.C_3050025 Branchiostoma floridae estExt_gwp.C_3050025 N 0.738
estExt_fgenesh2_pg.C_1620033 Branchiostoma floridae estExt_fgenesh2_pg.C_1620033 N 0.738
ENSCSAVG00000002667 Ciona savignyi ENSCSAVG00000002667 N 0.726
POLR2G Vicugna pacos ENSVPAG00000009534 N 0.714