CpipJ_CPIJ001219 (Culex pipiens)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 CpipJ_CPIJ001219 T59882_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ001219-RA S1 78 159

Links

Other S1 family RBPs
Other Culex pipiens RBPs

68 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPIJ001219 Culex quinquefasciatus CPIJ001219 N 1.000
AAEL003401 Aedes aegypti AAEL003401 N 0.976
GD20374 Drosophila simulans FBgn0191847 N 0.951
GL12210 Drosophila persimilis FBgn0149817 N 0.951
GI22645 Drosophila mojavensis FBgn0145373 N 0.951
GM25797 Drosophila sechellia FBgn0180653 N 0.951
GJ23373 Drosophila virilis FBgn0210474 N 0.951
GA27654-RA Drosophila pseudoobscura FBgn0249019 N 0.951
GE26402 Drosophila yakuba FBgn0243428 N 0.951
GK11212 Drosophila willistoni FBgn0213223 N 0.951
GH18755 Drosophila grimshawi FBgn0126222 N 0.951
GF11824 Drosophila ananassae FBgn0088864 N 0.951
GG20814 Drosophila erecta FBgn0113000 N 0.951
GA16051-RA Drosophila pseudoobscura FBgn0076067 N 0.951
Rpb7 Drosophila melanogaster FBgn0051155 N 0.951
PHUM079870 Pediculus humanus PHUM079870 N 0.927
nasonia_NCBI_hmm304924 Nasonia vitripennis nasonia_NCBI_hmm304924 N 0.915
amel4_ncbi_hmm13760 Apis mellifera amel4_ncbi_hmm13760 N 0.890
amel4_ncbi_hmm13760 Tribolium castaneum amel4_ncbi_hmm13760 N 0.890
AGAP002121 Anopheles gambiae AGAP002121 N 0.866
DGIL_AUG5s10638g4t1 Acyrtosiphon pisum DGIL_AUG5s10638g4t1 N 0.817
estExt_Genewise1Plus.C_sca_120103 Lottia gigantea estExt_Genewise1Plus.C_sca_120103 N 0.774
XP_001176876.1 Strongylocentrotus purpuratus XP_001176876.1 N 0.774
XP_780458.1 Strongylocentrotus purpuratus XP_780458.1 N 0.774
XP_001175504.1 Strongylocentrotus purpuratus XP_001175504.1 N 0.774
XP_001175728.1 Strongylocentrotus purpuratus XP_001175728.1 N 0.774
PASA_GEN_8000031 Daphnia pulex PASA_GEN_8000031 N 0.774
ENSCING00000004991 Ciona intestinalis ENSCING00000004991 N 0.762
estExt_Genewise1Plus.C_2200037 Capitella teleta estExt_Genewise1Plus.C_2200037 N 0.750
AAI28969 Xenopus laevis AAI28969 N 0.750
polr2g Xenopus tropicalis ENSXETG00000006022 N 0.750
POLR2G Anolis carolinensis ENSACAG00000001005 N 0.750
XP_002157143.1 Hydra magnipapillata XP_002157143.1 N 0.750
polr2gl Danio rerio ENSDARG00000056127 N 0.750
estExt_fgenesh1_pg.C_1060040 Nematostella vectensis estExt_fgenesh1_pg.C_1060040 N 0.738
POLR2G Tursiops truncatus ENSTTRG00000002478 N 0.738
Ame_R013924 Ailuropoda melanoleuca Ame_R013924 N 0.738
POLR2G Pan troglodytes ENSPTRG00000003786 N 0.738
POLR2G Loxodonta africana ENSLAFG00000004354 N 0.738
POLR2G Gorilla gorilla ENSGGOG00000011739 N 0.738
POLR2G Macropus eugenii ENSMEUG00000011547 N 0.738
RPB7_BOVIN Bos taurus ENSBTAG00000009483 N 0.738
LOC100398629 Callithrix jacchus ENSCJAG00000018688 N 0.738
POLR2G Gasterosteus aculeatus ENSGACG00000017706 N 0.738
POLR2G Homo sapiens ENSG00000168002 N 0.738
POLR2G Cavia porcellus ENSCPOG00000001153 N 0.738
POLR2G Canis familiaris ENSCAFG00000015461 N 0.738
Polr2g Dipodomys ordii ENSDORG00000015696 N 0.738
LOC100063883 Equus caballus ENSECAG00000021465 N 0.738
ENSMLUG00000011039 Myotis lucifugus ENSMLUG00000011039 N 0.738
ENSMLUG00000003971 Myotis lucifugus ENSMLUG00000003971 N 0.738
POLR2G Procavia capensis ENSPCAG00000016408 N 0.738
POLR2G Oryzias latipes ENSORLG00000003154 N 0.738
ENSPPYG00000003147 Pongo pygmaeus ENSPPYG00000003147 N 0.738
Polr2g Rattus norvegicus ENSRNOG00000019439 N 0.738
POLR2G Takifugu rubripes ENSTRUG00000002492 N 0.738
POLR2G Macaca mulatta ENSMMUG00000014368 N 0.738
POLR2G Oryctolagus cuniculus ENSOCUG00000009485 N 0.738
Polr2g Mus musculus ENSMUSG00000071662 N 0.738
POLR2G Monodelphis domestica ENSMODG00000007984 N 0.738
POLR2G Ornithorhynchus anatinus ENSOANG00000005808 N 0.738
estExt_gwp.C_3050025 Branchiostoma floridae estExt_gwp.C_3050025 N 0.726
POLR2G Pteropus vampyrus ENSPVAG00000003481 N 0.726
estExt_fgenesh2_pg.C_1620033 Branchiostoma floridae estExt_fgenesh2_pg.C_1620033 N 0.726
104718 Helobdella robusta 104718 N 0.720
POLR2G Microcebus murinus ENSMICG00000009967 N 0.714
ENSCSAVG00000002667 Ciona savignyi ENSCSAVG00000002667 N 0.714
POLR2G Vicugna pacos ENSVPAG00000009534 N 0.702