CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RC3H1
(
Tupaia belangeri
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSTBEG00000005015
T03427_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000004332
CCCH ZF
414
440
YKTYMCRDMKQRGGCPRGASCTFAHSQ
Links
Other
CCCH ZF
family RBPs
Other
Tupaia belangeri
RBPs
93 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R008895
Ailuropoda melanoleuca
Ame_R008895
N
0.000
ENSCJAG00000016365
Callithrix jacchus
ENSCJAG00000016365
N
0.000
ENSPPYG00000012814
Pongo pygmaeus
ENSPPYG00000012814
N
0.000
ZRANB3
Macaca mulatta
ENSMMUG00000000765
N
0.000
ZRANB3
Ochotona princeps
ENSOPRG00000001431
N
0.000
ZRANB3
Pan troglodytes
ENSPTRG00000012492
N
0.000
ZRANB3
Sorex araneus
ENSSARG00000007481
N
0.000
ZRANB3
Spermophilus tridecemlineatus
ENSSTOG00000010155
N
0.000
ZRANB3
Tarsius syrichta
ENSTSYG00000002816
N
0.000
ZRANB3
Tursiops truncatus
ENSTTRG00000003932
N
0.000
ZRANB3
Vicugna pacos
ENSVPAG00000001487
N
0.000
ZRANB3
Microcebus murinus
ENSMICG00000013893
N
0.000
ZRANB3
Loxodonta africana
ENSLAFG00000015733
N
0.000
ZRANB3
Choloepus hoffmanni
ENSCHOG00000011223
N
0.000
ZRANB3
Cavia porcellus
ENSCPOG00000010385
N
0.000
ZRANB3
Dasypus novemcinctus
ENSDNOG00000013613
N
0.000
Zranb3
Dipodomys ordii
ENSDORG00000004211
N
0.000
ZRANB3
Equus caballus
ENSECAG00000011232
N
0.000
ZRANB3
Erinaceus europaeus
ENSEEUG00000011221
N
0.000
ZRANB3
Echinops telfairi
ENSETEG00000011048
N
0.000
ZRANB3
Homo sapiens
ENSG00000121988
N
0.000
ZRANB3
Gorilla gorilla
ENSGGOG00000003782
N
0.000
ZRANB3
Bos taurus
ENSBTAG00000026842
N
0.000