CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Zranb3
(
Dipodomys ordii
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSDORG00000004211
T26399_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000003936
RanBP ZF
619
648
PRKTWQCAFCTFINDSVLPYCEMCENPKGS
Links
Other
RanBP ZF
family RBPs
Other
Dipodomys ordii
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZRANB3
Equus caballus
ENSECAG00000011232
N
0.800
ZRANB3
Callithrix jacchus
ENSCJAG00000011678
N
0.767
ZRANB3
Choloepus hoffmanni
ENSCHOG00000011223
N
0.767
ZRANB3
Microcebus murinus
ENSMICG00000013893
N
0.767
ZRANB3
Macaca mulatta
ENSMMUG00000000765
N
0.767
ZRANB3
Dasypus novemcinctus
ENSDNOG00000013613
N
0.767
ZRANB3
Oryctolagus cuniculus
ENSOCUG00000007243
N
0.742
ZRANB3
Tursiops truncatus
ENSTTRG00000003932
N
0.733
ZRANB3
Cavia porcellus
ENSCPOG00000010385
N
0.733
ZRANB3
Loxodonta africana
ENSLAFG00000015733
N
0.733
ZRANB3
Bos taurus
ENSBTAG00000026842
N
0.733
ZRANB3
Spermophilus tridecemlineatus
ENSSTOG00000010155
N
0.710
ENSCJAG00000016365
Callithrix jacchus
ENSCJAG00000016365
N
0.700
ZRANB3
Pan troglodytes
ENSPTRG00000012492
N
0.700
ZRANB3
Erinaceus europaeus
ENSEEUG00000011221
N
0.700
ZRANB3
Echinops telfairi
ENSETEG00000011048
N
0.700
ZRANB3
Gorilla gorilla
ENSGGOG00000003782
N
0.700
ZRANB3
Ochotona princeps
ENSOPRG00000001431
N
0.700
Ame_R008895
Ailuropoda melanoleuca
Ame_R008895
N
0.700