CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZRANB3
(
Spermophilus tridecemlineatus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSSTOG00000010155
T26809_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000009111
RanBP ZF
553
583
PPGKDWQCGFCTYINNSLLSYCEMCENPQGS
Links
Other
RanBP ZF
family RBPs
Other
Spermophilus tridecemlineatus
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZRANB3
Equus caballus
ENSECAG00000011232
N
0.871
ZRANB3
Sus scrofa
ENSSSCG00000015694
N
0.806
ZRANB3
Oryctolagus cuniculus
ENSOCUG00000007243
N
0.806
ZRANB3
Loxodonta africana
ENSLAFG00000015733
N
0.806
ZRANB3
Tarsius syrichta
ENSTSYG00000002816
N
0.774
ZRANB3
Macaca mulatta
ENSMMUG00000000765
N
0.774
ZRANB3
Echinops telfairi
ENSETEG00000011048
N
0.774
ZRANB3
Microcebus murinus
ENSMICG00000013893
N
0.774
ZRANB3
Ochotona princeps
ENSOPRG00000001431
N
0.774
Ame_R008895
Ailuropoda melanoleuca
Ame_R008895
N
0.774
ZRANB3
Cavia porcellus
ENSCPOG00000010385
N
0.774
ZRANB3
Sorex araneus
ENSSARG00000007481
N
0.774
ZRANB3
Choloepus hoffmanni
ENSCHOG00000011223
N
0.742
ZRANB3
Monodelphis domestica
ENSMODG00000000848
N
0.742
ZRANB3
Callithrix jacchus
ENSCJAG00000011678
N
0.742
ENSCJAG00000016365
Callithrix jacchus
ENSCJAG00000016365
N
0.742
ZRANB3
Macropus eugenii
ENSMEUG00000009722
N
0.742
ZRANB3
Tursiops truncatus
ENSTTRG00000003932
N
0.742
ZRANB3
Pan troglodytes
ENSPTRG00000012492
N
0.710
ZRANB3
Homo sapiens
ENSG00000121988
N
0.710
ZRANB3
Bos taurus
ENSBTAG00000026842
N
0.710
Zranb3
Dipodomys ordii
ENSDORG00000004211
N
0.710
ZRANB3
Gorilla gorilla
ENSGGOG00000003782
N
0.710