B9HDY4_POPTR (Populus trichocarpa)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 POPTR_0006s15080 T04034_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s15080.1 CCCH ZF 484 508
POPTR_0006s15080.1 CCCH ZF 512 536
POPTR_0006s15080.1 CCCH ZF 541 563

Links

Other CCCH ZF family RBPs
Other Populus trichocarpa RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.018350 Cucumis sativus Cucsa.018350 N 0.703
Glyma14g39390.1 Glycine max Glyma14g39390.1 N 0.703
GSVIVG00015184001 Vitis vinifera GSVIVG00015184001 N 0.703
PK20740.1 Cannabis sativa PK20740.1 N 0.707