SB09G006050 (Sorghum bicolor)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Sb09g006050 T04132_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb09g006050.1 CCCH ZF 113 138

Links

Other CCCH ZF family RBPs
Other Sorghum bicolor RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_03304 Botrytis cinerea BC1G_03304 N 0.000
CHGG_01633 Chaetomium globosum CHGG_01633 N 0.000
estExt_fgenesh1_pg.C_190026 Neurospora tetrasperma estExt_fgenesh1_pg.C_190026 N 0.000
estExt_fgenesh3_kg.C_20419 Neurospora discreta estExt_fgenesh3_kg.C_20419 N 0.000
estExt_Genewise1Plus.C_140391 Trichoderma atroviride estExt_Genewise1Plus.C_140391 N 0.000
estExt_Genewise1Plus.C_20880 Myceliophthora thermophila estExt_Genewise1Plus.C_20880 N 0.000
e_gw1.11.513.1 Trichoderma virens e_gw1.11.513.1 N 0.000
e_gw1.3.309.1 Trichoderma reesei e_gw1.3.309.1 N 0.000
e_gw1.4.1619.1 Cryphonectria parasitica e_gw1.4.1619.1 N 0.000
e_gw1.4.1880.1 Thielavia terrestris e_gw1.4.1880.1 N 0.000
fgenesh1_pg.sca_1_chr1_3_0000355 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000355 N 0.000
FGSG_01010 Fusarium graminearum FGSG_01010 N 0.000
FOXG_00383 Fusarium oxysporum FOXG_00383 N 0.000
FVEG_01134 Fusarium verticillioides FVEG_01134 N 0.000
GLRG_01621 Colletotrichum graminicola GLRG_01621 N 0.000
NCU02633 Neurospora crassa NCU02633 N 0.000
SS1G_06737 Sclerotinia sclerotiorum SS1G_06737 N 0.000