SS1G_06737 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_06737 T30977_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_06737 RRM 122 195
SS1T_06737 RRM 297 352

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_03304 Botrytis cinerea BC1G_03304 N 0.969
estExt_Genewise1Plus.C_20880 Myceliophthora thermophila estExt_Genewise1Plus.C_20880 N 0.777
CHGG_01633 Chaetomium globosum CHGG_01633 N 0.769
e_gw1.3.309.1 Trichoderma reesei e_gw1.3.309.1 N 0.762
GLRG_01621 Colletotrichum graminicola GLRG_01621 N 0.762
e_gw1.4.1619.1 Cryphonectria parasitica e_gw1.4.1619.1 N 0.759
e_gw1.11.513.1 Trichoderma virens e_gw1.11.513.1 N 0.746
NCU02633 Neurospora crassa NCU02633 N 0.740
estExt_fgenesh3_kg.C_20419 Neurospora discreta estExt_fgenesh3_kg.C_20419 N 0.740
estExt_fgenesh1_pg.C_190026 Neurospora tetrasperma estExt_fgenesh1_pg.C_190026 N 0.740
e_gw1.4.1880.1 Thielavia terrestris e_gw1.4.1880.1 N 0.738
fgenesh1_pg.sca_1_chr1_3_0000355 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000355 N 0.737
MGG_04442 Magnaporthe oryzae MGG_04442 N 0.735
FOXG_00383 Fusarium oxysporum FOXG_00383 N 0.735
FGSG_01010 Fusarium graminearum FGSG_01010 N 0.733
FVEG_01134 Fusarium verticillioides FVEG_01134 N 0.727
estExt_Genewise1Plus.C_140391 Trichoderma atroviride estExt_Genewise1Plus.C_140391 N 0.718
HCAG_01782 Histoplasma capsulatum HCAG_01782 N 0.718
TERG_07903 Trichophyton rubrum TERG_07903 N 0.702
MGYG_04491 Microsporum gypseum MGYG_04491 N 0.702
TESG_05610 Trichophyton tonsurans TESG_05610 N 0.702
GSTUMT00002378001 Tuber melanosporum GSTUMT00002378001 N 0.702
ARB_02854 Arthroderma benhamiae ARB_02854 N 0.702