e_gwh1.21.47.1 (Laccaria bicolor)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 e_gwh1.21.47.1 T04958_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gwh1.21.47.1 CCCH ZF 75 100
e_gwh1.21.47.1 CCCH ZF 161 181

Links

Other CCCH ZF family RBPs
Other Laccaria bicolor RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AGAP008634 Anopheles gambiae AGAP008634 N 0.702
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 0.708
EEB90926.1 Moniliophthora perniciosa EEB90926.1 N 0.809
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.745
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.872
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.766
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.915
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.745
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.894
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.936
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.702
GF12572 Drosophila ananassae FBgn0089609 N 0.702
GH21804 Drosophila grimshawi FBgn0129265 N 0.702
GI20775 Drosophila mojavensis FBgn0143510 N 0.702
GJ20510 Drosophila virilis FBgn0207650 N 0.702
GL11672 Drosophila persimilis FBgn0149281 N 0.702
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.745
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.708
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.723
Smp_099900 Schistosoma mansoni Smp_099900 N 0.702
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.708
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.702
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.702