ZCCHC6 (Tetraodon nigroviridis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSTNIG00000015951 T10524_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000019039 CCHC ZF 589 606
ENSTNIP00000019039 CCHC ZF 971 988

Links

Other CCHC ZF family RBPs
Other Tetraodon nigroviridis RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCSAVG00000006670 Ciona savignyi ENSCSAVG00000006670 N 0.722
zcchc11 Xenopus tropicalis ENSXETG00000008061 N 0.778
ZCCHC11 Takifugu rubripes ENSTRUG00000000844 N 0.833
ZCCHC11 Tupaia belangeri ENSTBEG00000001230 N 0.778
ZCCHC11 Monodelphis domestica ENSMODG00000000618 N 0.750
ZCCHC6 Gallus gallus ENSGALG00000012607 N 0.917
ZCCHC6 Danio rerio ENSDARG00000074645 N 0.833
ZCCHC6 Takifugu rubripes ENSTRUG00000000750 N 1.000
ZCCHC6 Equus caballus ENSECAG00000014831 N 0.944
ZCCHC6 Sorex araneus ENSSARG00000009763 N 0.917
ZCCHC6 Oryzias latipes ENSORLG00000001714 N 0.917
ZCCHC6 Oryctolagus cuniculus ENSOCUG00000010949 N 0.833
ZCCHC6 Gasterosteus aculeatus ENSGACG00000004735 N 0.972
ZCCHC6 Myotis lucifugus ENSMLUG00000001298 N 0.917
ZCCHC6 Anolis carolinensis ENSACAG00000000279 N 0.944