ENSCSAVG00000006670 (Ciona savignyi)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSCSAVG00000006670 T10075_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000011403 CCHC ZF 48 65
ENSCSAVP00000011403 CCHC ZF 85 101
ENSCSAVP00000011404 CCHC ZF 501 518
ENSCSAVP00000011404 CCHC ZF 883 900

Links

Other CCHC ZF family RBPs
Other Ciona savignyi RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCCHC6 Equus caballus ENSECAG00000014831 N 0.778
ZCCHC6 Sorex araneus ENSSARG00000009763 N 0.778
ZCCHC6 Myotis lucifugus ENSMLUG00000001298 N 0.778
ZCCHC6 Anolis carolinensis ENSACAG00000000279 N 0.778
ZCCHC11 Monodelphis domestica ENSMODG00000000618 N 0.750
ZCCHC6 Gallus gallus ENSGALG00000012607 N 0.750
ZCCHC6 Gasterosteus aculeatus ENSGACG00000004735 N 0.750
ZCCHC6 Tetraodon nigroviridis ENSTNIG00000015951 N 0.722
ZCCHC6 Takifugu rubripes ENSTRUG00000000750 N 0.722
zcchc11 Xenopus tropicalis ENSXETG00000008061 N 0.722
ZCCHC6 Callithrix jacchus ENSCJAG00000001845 N 0.722
ZCCHC6 Oryctolagus cuniculus ENSOCUG00000010949 N 0.722
ZCCHC6 Homo sapiens ENSG00000083223 N 0.722
ZCCHC6 Echinops telfairi ENSETEG00000007739 N 0.722
ZCCHC6 Macaca mulatta ENSMMUG00000003401 N 0.722
ZCCHC6 Ochotona princeps ENSOPRG00000002893 N 0.722
ZCCHC6 Procavia capensis ENSPCAG00000011630 N 0.722
ZCCHC6 Pan troglodytes ENSPTRG00000021076 N 0.722