LOC_Os01g38058 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g38058 T10811_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g38058.1 CCHC ZF 309 326

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02178.1 Alternaria brassicicola AB02178.1 N 0.000
ACLA_037570 Aspergillus clavatus CADACLAG00003297 N 0.000
AFLA_085050 Aspergillus flavus CADAFLAG00001284 N 0.000
AFUA_3G09770 Aspergillus fumigatus CADAFUAG00005073 N 0.000
An16g03400 Aspergillus niger CADANGAG00012812 N 0.000
ANIA_05009 Aspergillus nidulans CADANIAG00005383 N 0.000
AO090005001273 Aspergillus oryzae CADAORAG00003159 N 0.000
ATEG_04498 Aspergillus terreus CADATEAG00009601 N 0.000
EAT78031.2 Phaeosphaeria nodorum EAT78031.2 N 0.000
fgenesh1_pm.00168_#_218 Aspergillus carbonarius fgenesh1_pm.00168_#_218 N 0.000
GSTUMT00007469001 Tuber melanosporum GSTUMT00007469001 N 0.000
MCYG_03431 Microsporum canis MCYG_03431 N 0.000
MGYG_00597 Microsporum gypseum MGYG_00597 N 0.000
NFIA_067530 Neosartorya fischeri CADNFIAG00005936 N 0.000
Pc12g15760 Penicillium chrysogenum Pc12g15760 N 0.000
Pc22g26960 Penicillium chrysogenum Pc22g26960 N 0.000
PMAA_025600 Penicillium marneffei PMAA_025600 N 0.000
PTRG_03270 Pyrenophora tritici repentis PTRG_03270 N 0.000
SNOG_14491 Stagonospora nodorum SNOG_14491 N 0.000
TEQG_00939 Trichophyton equinum TEQG_00939 N 0.000
TERG_00938 Trichophyton rubrum TERG_00938 N 0.000
TESG_04474 Trichophyton tonsurans TESG_04474 N 0.000
TRV_03302 Trichophyton verrucosum TRV_03302 N 0.000