LOC_Os07g16240 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g16240 T11759_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g16240.1 CCHC ZF 104 121

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

352 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08315.1 Alternaria brassicicola AB08315.1 N 0.000
ADR062W Ashbya gossypii ADR062W N 0.000
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.000
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.000
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.000
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.000
cps3 Schizosaccharomyces pombe SPAC3A11.02 N 0.000
CTRG_02259 Candida tropicalis CTRG_02259 N 0.000
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.000
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.000
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.000
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.000
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.000
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.000
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.000
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.000
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.000
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.000
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.000
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.000
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.000
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.000
gw1.2.2109.1 Mucor circinelloides gw1.2.2109.1 N 0.000
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.000
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.000
NCU05007 Neurospora crassa NCU05007 N 0.000
orf19.7385 Candida albicans orf19.7385 N 0.000
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.000
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.000
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.000
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.000
SJAG_01535 Schizosaccharomyces japonicus SJAG_01535 N 0.000
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.000
SOCG_02788 Schizosaccharomyces octosporus SOCG_02788 N 0.000
SPCC1739.01 Schizosaccharomyces pombe SPCC1739.01 N 0.000
SPOG_02388 Schizosaccharomyces cryophilus SPOG_02388 N 0.000
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.000
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.000
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.000
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.000