B9N3Z3_POPTR (Populus trichocarpa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 POPTR_0005s00240 T12710_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s00240.1 CCHC ZF 754 771

Links

Other CCHC ZF family RBPs
Other Populus trichocarpa RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH78008 Xenopus laevis AAH78008 N 0.000
aff4 Danio rerio ENSDARG00000001857 N 0.000
AGAP004274 Anopheles gambiae AGAP004274 N 0.000
amel4_ncbi_hmm3606 Apis mellifera amel4_ncbi_hmm3606 N 0.000
BGIBMGA008619 Bombyx mori BGIBMGA008619 N 0.000
CPIJ002557 Culex quinquefasciatus CPIJ002557 N 0.000
CpipJ_CPIJ002557 Culex pipiens CpipJ_CPIJ002557 N 0.000
ENSRNOG00000031218 Rattus norvegicus ENSRNOG00000031218 N 0.000
e_gw.2303.4.1 Nematostella vectensis e_gw.2303.4.1 N 0.000
GA18942-RA Drosophila pseudoobscura FBgn0078941 N 0.000
nasonia_NCBI_hmm378444 Nasonia vitripennis nasonia_NCBI_hmm378444 N 0.000
zcchc10 Xenopus tropicalis ENSXETG00000004171 N 0.000