aff4 (Danio rerio)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSDARG00000001857 T10078_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000104337 CCHC ZF 21 38

Links

Other CCHC ZF family RBPs
Other Danio rerio RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CpipJ_CPIJ002557 Culex pipiens CpipJ_CPIJ002557 N 0.944
CPIJ002557 Culex quinquefasciatus CPIJ002557 N 0.944
zcchc10 Xenopus tropicalis ENSXETG00000004171 N 0.944
nasonia_NCBI_hmm378444 Nasonia vitripennis nasonia_NCBI_hmm378444 N 0.889
AGAP004274 Anopheles gambiae AGAP004274 N 0.889
AAH78008 Xenopus laevis AAH78008 N 0.889
BGIBMGA008619 Bombyx mori BGIBMGA008619 N 0.889
e_gw.326.71.1 Branchiostoma floridae e_gw.326.71.1 N 0.889
amel4_ncbi_hmm3606 Apis mellifera amel4_ncbi_hmm3606 N 0.833
ENSRNOG00000031218 Rattus norvegicus ENSRNOG00000031218 N 0.833
GA18942-RA Drosophila pseudoobscura FBgn0078941 N 0.778
CG5516 Drosophila melanogaster FBgn0038389 N 0.722