GA18942-RA (Drosophila pseudoobscura)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 FBgn0078941 T10624_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0271980 CCHC ZF 28 45

Links

Other CCHC ZF family RBPs
Other Drosophila pseudoobscura RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm378444 Nasonia vitripennis nasonia_NCBI_hmm378444 N 0.889
CG5516 Drosophila melanogaster FBgn0038389 N 0.889
amel4_ncbi_hmm3606 Apis mellifera amel4_ncbi_hmm3606 N 0.833
CpipJ_CPIJ002557 Culex pipiens CpipJ_CPIJ002557 N 0.833
zcchc10 Xenopus tropicalis ENSXETG00000004171 N 0.833
CPIJ002557 Culex quinquefasciatus CPIJ002557 N 0.833
aff4 Danio rerio ENSDARG00000001857 N 0.778
AAH78008 Xenopus laevis AAH78008 N 0.778
BGIBMGA008619 Bombyx mori BGIBMGA008619 N 0.778
ENSRNOG00000031218 Rattus norvegicus ENSRNOG00000031218 N 0.778
FVEG_02700 Fusarium verticillioides FVEG_02700 N 0.722
e_gw.326.71.1 Branchiostoma floridae e_gw.326.71.1 N 0.722
GSTUMT00003933001 Tuber melanosporum GSTUMT00003933001 N 0.722
FOXG_05436 Fusarium oxysporum FOXG_05436 N 0.722
NCU01017 Neurospora crassa NCU01017 N 0.722
AGAP004274 Anopheles gambiae AGAP004274 N 0.722