fgenesh1_pg.C_scaffold_2853000001 (Phytophthora ramorum)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_2853000001 T13909_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2853000001 CCHC ZF 133 150

Links

Other CCHC ZF family RBPs
Other Phytophthora ramorum RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE007079 Oryza indica BGIOSIBCE007079 N 0.000
cassava28473.m1 Manihot esculenta cassava28473.m1 N 0.000
LOC_Os02g29570 Oryza sativa LOC_Os02g29570 N 0.000
LOC_Os08g23510 Oryza sativa LOC_Os08g23510 N 0.000
LOC_Os11g24270 Oryza sativa LOC_Os11g24270 N 0.000
PGTG_06776 Puccinia graminis PGTG_06776 N 0.000
PGTG_13838 Puccinia graminis PGTG_13838 N 0.000
PGTG_16818 Puccinia graminis PGTG_16818 N 0.000
PGTG_16926 Puccinia graminis PGTG_16926 N 0.000