PGTG_13838 (Puccinia graminis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PGTG_13838 T08201_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_13838 CCHC ZF 64 81

Links

Other CCHC ZF family RBPs
Other Puccinia graminis RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_16926 Puccinia graminis PGTG_16926 N 1.000
PGTG_16818 Puccinia graminis PGTG_16818 N 1.000
PGTG_06776 Puccinia graminis PGTG_06776 N 0.944
PGTG_18222 Puccinia graminis PGTG_18222 N 0.889
LOC_Os09g09400 Oryza sativa LOC_Os09g09400 N 0.722
LOC_Os11g24270 Oryza sativa LOC_Os11g24270 N 0.722
CJA20544 Caenorhabditis japonica CJA20544 N 0.722
CJA19095 Caenorhabditis japonica CJA19095 N 0.722
CJA05016 Caenorhabditis japonica CJA05016 N 0.722
CJA17358 Caenorhabditis japonica CJA17358 N 0.722
CJA19667 Caenorhabditis japonica CJA19667 N 0.722