LjSGA_073314.1 (Lotus japonicus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LjSGA_073314.1 T15937_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_073314.1 CCHC ZF 220 237

Links

Other CCHC ZF family RBPs
Other Lotus japonicus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_212000013 Daphnia pulex fgenesh1_pg.C_scaffold_212000013 N 0.722
fgenesh1_pg.C_scaffold_26000082 Daphnia pulex fgenesh1_pg.C_scaffold_26000082 N 0.722
fgenesh1_pg.C_scaffold_421000001 Daphnia pulex fgenesh1_pg.C_scaffold_421000001 N 0.722
fgenesh1_pg.C_scaffold_601000001 Daphnia pulex fgenesh1_pg.C_scaffold_601000001 N 0.722
fgenesh1_pg.C_scaffold_93000071 Daphnia pulex fgenesh1_pg.C_scaffold_93000071 N 0.722
Genemark.8306_g Serpula lacrymans Genemark.8306_g N 0.722
LjSGA_056739.1 Lotus japonicus LjSGA_056739.1 N 0.778
LjSGA_072359.1 Lotus japonicus LjSGA_072359.1 N 0.889
LjSGA_077546.1 Lotus japonicus LjSGA_077546.1 N 0.944
LjSGA_083550.1 Lotus japonicus LjSGA_083550.1 N 0.944
LjSGA_088344.1 Lotus japonicus LjSGA_088344.1 N 0.944
LjSGA_091651.1 Lotus japonicus LjSGA_091651.1 N 0.944
LjSGA_113964.1 Lotus japonicus LjSGA_113964.1 N 0.944
LjSGA_114624.1 Lotus japonicus LjSGA_114624.1 N 0.944
LjSGA_115869.1 Lotus japonicus LjSGA_115869.1 N 0.944
LjSGA_118711.1 Lotus japonicus LjSGA_118711.1 N 0.944
LjSGA_120238.1 Lotus japonicus LjSGA_120238.1 N 0.944
LjSGA_129847.1 Lotus japonicus LjSGA_129847.1 N 0.944
LjSGA_130508.1 Lotus japonicus LjSGA_130508.1 N 0.944
LjSGA_132918.1 Lotus japonicus LjSGA_132918.1 N 0.944
LjSGA_133570.1 Lotus japonicus LjSGA_133570.1 N 0.944
LjSGA_136986.1.1 Lotus japonicus LjSGA_136986.1.1 N 0.944
Minc00264 Meloidogyne incognita Minc00264 N 0.722
SNAP_00021967 Daphnia pulex SNAP_00021967 N 0.722
SNAP_00029886 Daphnia pulex SNAP_00029886 N 0.722
SNAP_00039286 Daphnia pulex SNAP_00039286 N 0.722
SNAP_00040202 Daphnia pulex SNAP_00040202 N 0.722