CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_001200167.1
(
Strongylocentrotus purpuratus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
XP_001200167.1
T16363_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_001200167.1
CCHC ZF
2
19
VQCFNCSGWGHYARECPH
Links
Other
CCHC ZF
family RBPs
Other
Strongylocentrotus purpuratus
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Genemark.11725_g
Serpula lacrymans
Genemark.11725_g
N
0.000
K08D12.3
Caenorhabditis elegans
K08D12.3
N
0.000
PGTG_01711
Puccinia graminis
PGTG_01711
N
0.000
PGTG_08804
Puccinia graminis
PGTG_08804
N
0.000
PGTG_09249
Puccinia graminis
PGTG_09249
N
0.000
PGTG_14786
Puccinia graminis
PGTG_14786
N
0.000
PTTG_02229
Puccinia triticina
PTTG_02229
N
0.000