CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AO090003000297
(
Aspergillus oryzae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CADAORAG00000949
T18214_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAORAP00000932
KH
112
174
HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLI
CADAORAP00000932
KH
195
258
PLRLLIPHILIGSIIGKGGGRIREIQEASGARLNASDACLPLSTERSLVILGVADAVHIATYYV
CADAORAP00000932
KH
395
457
TQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYML
Links
Other
KH
family RBPs
Other
Aspergillus oryzae
RBPs
51 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_089710
Aspergillus clavatus
CADACLAG00008893
N
0.989
AFLA_035210
Aspergillus flavus
CADAFLAG00002896
N
1.000
AFUA_2G04940
Aspergillus fumigatus
CADAFUAG00003572
N
0.974
An11g04650
Aspergillus niger
CADANGAG00008801
N
0.732
ANIA_10257
Aspergillus nidulans
CADANIAG00008760
N
0.989
ARB_04979
Arthroderma benhamiae
ARB_04979
N
0.968
ATEG_06009
Aspergillus terreus
CADATEAG00002740
N
1.000
BC1G_02183
Botrytis cinerea
BC1G_02183
N
0.889
BDBG_05507
Blastomyces dermatitidis
BDBG_05507
N
0.942
CHGG_00920
Chaetomium globosum
CHGG_00920
N
0.884
CIMG_01064
Coccidioides immitis
CIMG_01064
N
0.953
CPSG_02144
Coccidioides posadasii
CPSG_02144
N
0.953
EAT80559.1
Phaeosphaeria nodorum
EAT80559.1
N
0.853
estExt_fgenesh1_pg.C_chr_110266
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_110266
N
0.889
estExt_fgenesh2_kg.C_10371
Thielavia terrestris
estExt_fgenesh2_kg.C_10371
N
0.768
estExt_fgenesh2_kg.C_120082
Neurospora tetrasperma
estExt_fgenesh2_kg.C_120082
N
0.863
estExt_Genewise1Plus.C_100607
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_100607
N
0.858
estExt_Genewise1Plus.C_22256
Myceliophthora thermophila
estExt_Genewise1Plus.C_22256
N
0.884
estExt_GeneWisePlus.C_30868
Trichoderma reesei
estExt_GeneWisePlus.C_30868
N
0.884
e_gw1.1.348.1
Nectria haematococca
e_gw1.1.348.1
N
0.889
e_gw1.11.790.1
Trichoderma virens
e_gw1.11.790.1
N
0.884
e_gw1.14.653.1
Trichoderma atroviride
e_gw1.14.653.1
N
0.884
e_gw1.6.1154.1
Cryphonectria parasitica
e_gw1.6.1154.1
N
0.863
fgenesh1_pm.00118_#_358
Aspergillus carbonarius
fgenesh1_pm.00118_#_358
N
0.989
fgenesh1_pm.C_scaffold_6000065
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_6000065
N
0.900
fgenesh3_pm.C_scaffold_4000046
Neurospora discreta
fgenesh3_pm.C_scaffold_4000046
N
0.863
FGSG_01055
Fusarium graminearum
FGSG_01055
N
0.874
FOXG_00333
Fusarium oxysporum
FOXG_00333
N
0.889
FVEG_01188
Fusarium verticillioides
FVEG_01188
N
0.889
GLRG_01526
Colletotrichum graminicola
GLRG_01526
N
0.895
GSTUMT00006874001
Tuber melanosporum
GSTUMT00006874001
N
0.889
HCAG_03732
Histoplasma capsulatum
HCAG_03732
N
0.942
MCYG_04537
Microsporum canis
MCYG_04537
N
0.968
MGG_00514
Magnaporthe oryzae
MGG_00514
N
0.884
MGYG_02104
Microsporum gypseum
MGYG_02104
N
0.963
NCU09237
Neurospora crassa
NCU09237
N
0.863
NFIA_081670
Neosartorya fischeri
CADNFIAG00007754
N
0.974
PABG_01674
Paracoccidioides brasiliensis
PABG_01674
N
0.937
Pa_1_10880
Podospora anserina
Pa_1_10880
N
0.874
Pc12g10310
Penicillium chrysogenum
Pc12g10310
N
0.974
PMAA_029670
Penicillium marneffei
PMAA_029670
N
0.979
PTRG_03178
Pyrenophora tritici repentis
PTRG_03178
N
0.847
SNOG_12147
Stagonospora nodorum
SNOG_12147
N
0.853
SS1G_14233
Sclerotinia sclerotiorum
SS1G_14233
N
0.895
TEQG_02012
Trichophyton equinum
TEQG_02012
N
0.968
TERG_03362
Trichophyton rubrum
TERG_03362
N
0.968
TESG_01064
Trichophyton tonsurans
TESG_01064
N
0.968
TRV_06307
Trichophyton verrucosum
TRV_06307
N
0.968
UREG_01012
Uncinocarpus reesii
UREG_01012
N
0.953
VDAG_04308
Verticillium dahliae
VDAG_04308
N
0.884
VDBG_04768
Verticillium albo atrum
VDBG_04768
N
0.884