VDBG_04768 (Verticillium albo atrum)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 VDBG_04768 T17913_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDBG_04768T0 KH 116 178
VDBG_04768T0 KH 199 262
VDBG_04768T0 KH 404 466

Links

Other KH family RBPs
Other Verticillium albo atrum RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_04308 Verticillium dahliae VDAG_04308 N 1.000
GLRG_01526 Colletotrichum graminicola GLRG_01526 N 0.968
e_gw1.14.653.1 Trichoderma atroviride e_gw1.14.653.1 N 0.947
e_gw1.11.790.1 Trichoderma virens e_gw1.11.790.1 N 0.947
estExt_GeneWisePlus.C_30868 Trichoderma reesei estExt_GeneWisePlus.C_30868 N 0.947
FVEG_01188 Fusarium verticillioides FVEG_01188 N 0.947
FOXG_00333 Fusarium oxysporum FOXG_00333 N 0.947
e_gw1.1.348.1 Nectria haematococca e_gw1.1.348.1 N 0.937
estExt_Genewise1Plus.C_22256 Myceliophthora thermophila estExt_Genewise1Plus.C_22256 N 0.937
CHGG_00920 Chaetomium globosum CHGG_00920 N 0.937
FGSG_01055 Fusarium graminearum FGSG_01055 N 0.932
MGG_00514 Magnaporthe oryzae MGG_00514 N 0.932
Pa_1_10880 Podospora anserina Pa_1_10880 N 0.926
NCU09237 Neurospora crassa NCU09237 N 0.921
estExt_fgenesh2_kg.C_120082 Neurospora tetrasperma estExt_fgenesh2_kg.C_120082 N 0.921
fgenesh3_pm.C_scaffold_4000046 Neurospora discreta fgenesh3_pm.C_scaffold_4000046 N 0.921
e_gw1.6.1154.1 Cryphonectria parasitica e_gw1.6.1154.1 N 0.916
SS1G_14233 Sclerotinia sclerotiorum SS1G_14233 N 0.905
BC1G_02183 Botrytis cinerea BC1G_02183 N 0.900
MGYG_02104 Microsporum gypseum MGYG_02104 N 0.895
ARB_04979 Arthroderma benhamiae ARB_04979 N 0.889
MCYG_04537 Microsporum canis MCYG_04537 N 0.889
TRV_06307 Trichophyton verrucosum TRV_06307 N 0.889
TESG_01064 Trichophyton tonsurans TESG_01064 N 0.889
TEQG_02012 Trichophyton equinum TEQG_02012 N 0.889
TERG_03362 Trichophyton rubrum TERG_03362 N 0.889
CIMG_01064 Coccidioides immitis CIMG_01064 N 0.884
CPSG_02144 Coccidioides posadasii CPSG_02144 N 0.884
UREG_01012 Uncinocarpus reesii UREG_01012 N 0.884
Pc12g10310 Penicillium chrysogenum Pc12g10310 N 0.884
fgenesh1_pm.00118_#_358 Aspergillus carbonarius fgenesh1_pm.00118_#_358 N 0.884
AFLA_035210 Aspergillus flavus CADAFLAG00002896 N 0.884
AO090003000297 Aspergillus oryzae CADAORAG00000949 N 0.884
ATEG_06009 Aspergillus terreus CADATEAG00002740 N 0.884
PMAA_029670 Penicillium marneffei PMAA_029670 N 0.884
BDBG_05507 Blastomyces dermatitidis BDBG_05507 N 0.879
ANIA_10257 Aspergillus nidulans CADANIAG00008760 N 0.879
HCAG_03732 Histoplasma capsulatum HCAG_03732 N 0.879
ACLA_089710 Aspergillus clavatus CADACLAG00008893 N 0.879
estExt_fgenesh1_pg.C_chr_110266 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_110266 N 0.879
AFUA_2G04940 Aspergillus fumigatus CADAFUAG00003572 N 0.874
PABG_01674 Paracoccidioides brasiliensis PABG_01674 N 0.874
NFIA_081670 Neosartorya fischeri CADNFIAG00007754 N 0.874
fgenesh1_pm.C_scaffold_6000065 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_6000065 N 0.868
GSTUMT00006874001 Tuber melanosporum GSTUMT00006874001 N 0.868
estExt_Genewise1Plus.C_100607 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_100607 N 0.821
estExt_fgenesh2_kg.C_10371 Thielavia terrestris estExt_fgenesh2_kg.C_10371 N 0.816
SNOG_12147 Stagonospora nodorum SNOG_12147 N 0.816
EAT80559.1 Phaeosphaeria nodorum EAT80559.1 N 0.816
PTRG_03178 Pyrenophora tritici repentis PTRG_03178 N 0.811