CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFUA_2G04940
(
Aspergillus fumigatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CADAFUAG00003572
T18194_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00003572
KH
113
175
HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLI
CADAFUAP00003572
KH
196
259
PLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDSCLPLSSERSLVILGVADSVHIATYYV
CADAFUAP00003572
KH
397
459
TQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYML
Links
Other
KH
family RBPs
Other
Aspergillus fumigatus
RBPs
51 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NFIA_081670
Neosartorya fischeri
CADNFIAG00007754
N
1.000
ACLA_089710
Aspergillus clavatus
CADACLAG00008893
N
0.984
fgenesh1_pm.00118_#_358
Aspergillus carbonarius
fgenesh1_pm.00118_#_358
N
0.974
AFLA_035210
Aspergillus flavus
CADAFLAG00002896
N
0.974
ATEG_06009
Aspergillus terreus
CADATEAG00002740
N
0.974
AO090003000297
Aspergillus oryzae
CADAORAG00000949
N
0.974
ANIA_10257
Aspergillus nidulans
CADANIAG00008760
N
0.968
TEQG_02012
Trichophyton equinum
TEQG_02012
N
0.958
MCYG_04537
Microsporum canis
MCYG_04537
N
0.958
ARB_04979
Arthroderma benhamiae
ARB_04979
N
0.958
TERG_03362
Trichophyton rubrum
TERG_03362
N
0.958
Pc12g10310
Penicillium chrysogenum
Pc12g10310
N
0.958
TESG_01064
Trichophyton tonsurans
TESG_01064
N
0.958
TRV_06307
Trichophyton verrucosum
TRV_06307
N
0.958
PMAA_029670
Penicillium marneffei
PMAA_029670
N
0.958
MGYG_02104
Microsporum gypseum
MGYG_02104
N
0.953
UREG_01012
Uncinocarpus reesii
UREG_01012
N
0.942
BDBG_05507
Blastomyces dermatitidis
BDBG_05507
N
0.942
CIMG_01064
Coccidioides immitis
CIMG_01064
N
0.942
HCAG_03732
Histoplasma capsulatum
HCAG_03732
N
0.942
CPSG_02144
Coccidioides posadasii
CPSG_02144
N
0.942
PABG_01674
Paracoccidioides brasiliensis
PABG_01674
N
0.937
FOXG_00333
Fusarium oxysporum
FOXG_00333
N
0.889
fgenesh1_pm.C_scaffold_6000065
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_6000065
N
0.889
e_gw1.14.653.1
Trichoderma atroviride
e_gw1.14.653.1
N
0.889
e_gw1.11.790.1
Trichoderma virens
e_gw1.11.790.1
N
0.889
estExt_GeneWisePlus.C_30868
Trichoderma reesei
estExt_GeneWisePlus.C_30868
N
0.889
FVEG_01188
Fusarium verticillioides
FVEG_01188
N
0.889
MGG_00514
Magnaporthe oryzae
MGG_00514
N
0.884
GLRG_01526
Colletotrichum graminicola
GLRG_01526
N
0.884
SS1G_14233
Sclerotinia sclerotiorum
SS1G_14233
N
0.884
Pa_1_10880
Podospora anserina
Pa_1_10880
N
0.884
BC1G_02183
Botrytis cinerea
BC1G_02183
N
0.879
estExt_fgenesh1_pg.C_chr_110266
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_110266
N
0.879
e_gw1.1.348.1
Nectria haematococca
e_gw1.1.348.1
N
0.879
CHGG_00920
Chaetomium globosum
CHGG_00920
N
0.874
FGSG_01055
Fusarium graminearum
FGSG_01055
N
0.874
estExt_Genewise1Plus.C_22256
Myceliophthora thermophila
estExt_Genewise1Plus.C_22256
N
0.874
VDAG_04308
Verticillium dahliae
VDAG_04308
N
0.874
VDBG_04768
Verticillium albo atrum
VDBG_04768
N
0.874
GSTUMT00006874001
Tuber melanosporum
GSTUMT00006874001
N
0.874
estExt_fgenesh2_kg.C_120082
Neurospora tetrasperma
estExt_fgenesh2_kg.C_120082
N
0.858
NCU09237
Neurospora crassa
NCU09237
N
0.858
fgenesh3_pm.C_scaffold_4000046
Neurospora discreta
fgenesh3_pm.C_scaffold_4000046
N
0.858
e_gw1.6.1154.1
Cryphonectria parasitica
e_gw1.6.1154.1
N
0.853
estExt_Genewise1Plus.C_100607
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_100607
N
0.847
SNOG_12147
Stagonospora nodorum
SNOG_12147
N
0.842
EAT80559.1
Phaeosphaeria nodorum
EAT80559.1
N
0.842
PTRG_03178
Pyrenophora tritici repentis
PTRG_03178
N
0.837
estExt_fgenesh2_kg.C_10371
Thielavia terrestris
estExt_fgenesh2_kg.C_10371
N
0.758
An11g04650
Aspergillus niger
CADANGAG00008801
N
0.716