CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HDLBP
(
Macaca mulatta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMMUG00000004730
T19059_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000006291
KH
5
66
TKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYM
ENSMMUP00000006291
KH
79
139
SISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRI
ENSMMUP00000006291
KH
151
212
EVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQL
ENSMMUP00000006291
KH
225
286
TVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKEL
ENSMMUP00000006291
KH
298
359
EDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRI
ENSMMUP00000006291
KH
371
463
TLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENPVHSAEPVVQENGDEAGEGREAKDSDPGSPRRCDIIIISGRKEKCEAAKEAL
ENSMMUP00000006291
KH
470
501
TIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVD
ENSMMUP00000006293
KH
1
36
MQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARI
ENSMMUP00000006293
KH
49
107
VSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQI
ENSMMUP00000006293
KH
120
180
YVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKREL
ENSMMUP00000006293
KH
192
253
TKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYM
ENSMMUP00000006293
KH
266
326
SISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRI
ENSMMUP00000006293
KH
338
399
EVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQL
ENSMMUP00000006293
KH
412
473
TVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKEL
ENSMMUP00000006293
KH
485
546
EDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRI
ENSMMUP00000006293
KH
558
650
TLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENPVHSAEPVVQENGDEAGEGREAKDSDPGSPRRCDIIIISGRKEKCEAAKEAL
ENSMMUP00000006293
KH
657
717
TIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGL
ENSMMUP00000006293
KH
737
780
KLSVTVDPKYHPKIIGRKGAVITQIRLEHDAIDHILNLEEEYLA
Links
Other
KH
family RBPs
Other
Macaca mulatta
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HDLBP
Callithrix jacchus
ENSCJAG00000006152
N
0.967
HDLBP
Homo sapiens
ENSG00000115677
N
0.985
HDLBP
Pan troglodytes
ENSPTRG00000013121
N
0.986