HDLBP (Callithrix jacchus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCJAG00000006152 T18532_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000011532 KH 98 143
ENSCJAP00000011532 KH 152 212
ENSCJAP00000011532 KH 224 282
ENSCJAP00000011532 KH 297 357
ENSCJAP00000011532 KH 366 424
ENSCJAP00000011532 KH 437 497
ENSCJAP00000011532 KH 509 570
ENSCJAP00000011532 KH 583 643
ENSCJAP00000011532 KH 655 716
ENSCJAP00000011532 KH 729 790
ENSCJAP00000011532 KH 802 863
ENSCJAP00000011532 KH 875 967
ENSCJAP00000011532 KH 974 1034
ENSCJAP00000011532 KH 1054 1117
ENSCJAP00000011532 KH 1129 1190
ENSCJAP00000042354 KH 98 143
ENSCJAP00000042354 KH 152 212
ENSCJAP00000042354 KH 224 283
ENSCJAP00000042354 KH 296 356
ENSCJAP00000042354 KH 365 423
ENSCJAP00000042354 KH 436 496
ENSCJAP00000042354 KH 508 569
ENSCJAP00000042354 KH 582 642
ENSCJAP00000042354 KH 654 715
ENSCJAP00000042354 KH 728 789
ENSCJAP00000042354 KH 801 862
ENSCJAP00000042354 KH 874 966
ENSCJAP00000042354 KH 973 1033
ENSCJAP00000042354 KH 1053 1116
ENSCJAP00000042354 KH 1128 1189
ENSCJAP00000044346 KH 133 178
ENSCJAP00000044346 KH 187 247
ENSCJAP00000044346 KH 259 318
ENSCJAP00000044346 KH 331 389
ENSCJAP00000044346 KH 402 462
ENSCJAP00000044346 KH 474 535
ENSCJAP00000044346 KH 548 608
ENSCJAP00000044346 KH 620 681
ENSCJAP00000044346 KH 694 755
ENSCJAP00000044346 KH 767 828
ENSCJAP00000044346 KH 840 932
ENSCJAP00000044346 KH 939 999
ENSCJAP00000044346 KH 1019 1082
ENSCJAP00000044346 KH 1094 1155
ENSCJAP00000045391 KH 46 91
ENSCJAP00000045391 KH 100 160
ENSCJAP00000045391 KH 172 231
ENSCJAP00000045391 KH 244 304
ENSCJAP00000045391 KH 313 371
ENSCJAP00000045391 KH 384 445
ENSCJAP00000045391 KH 457 518
ENSCJAP00000045391 KH 530 622
ENSCJAP00000045391 KH 629 689
ENSCJAP00000045391 KH 709 755
ENSCJAP00000047983 KH 1 35
ENSCJAP00000047983 KH 48 106
ENSCJAP00000047983 KH 119 179
ENSCJAP00000047983 KH 191 252
ENSCJAP00000047983 KH 265 325
ENSCJAP00000047983 KH 337 398
ENSCJAP00000047983 KH 411 472
ENSCJAP00000047983 KH 484 545
ENSCJAP00000047983 KH 557 649
ENSCJAP00000047983 KH 656 716
ENSCJAP00000047983 KH 736 780

Links

Other KH family RBPs
Other Callithrix jacchus RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.983
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.982
HDLBP Homo sapiens ENSG00000115677 N 0.982
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.975
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.974
Hdlbp Mus musculus ENSMUSG00000034088 N 0.974
HDLBP Canis familiaris ENSCAFG00000012913 N 0.968
LOC100057882 Equus caballus ENSECAG00000012829 N 0.968
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.968
HDLBP Macaca mulatta ENSMMUG00000004730 N 0.967
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.967
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.964
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.963
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.954
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.942
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.935
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.923
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.916
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.904
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.903
HDLBP Felis catus ENSFCAG00000010455 N 0.890
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.838
AAH44314 Xenopus laevis AAH44314 N 0.829
hdlbp Danio rerio ENSDARG00000009830 N 0.804
HDLBP Sorex araneus ENSSARG00000012639 N 0.801
HDLBP Oryzias latipes ENSORLG00000002226 N 0.797
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.785
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.783
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.782
HDLBP Erinaceus europaeus ENSEEUG00000014648 N 0.776
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.761
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.737
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.731
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.730
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.725