HDLBP (Pan troglodytes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPTRG00000013121 T19375_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000022470 KH 98 143
ENSPTRP00000022470 KH 152 212
ENSPTRP00000022470 KH 224 284
ENSPTRP00000022470 KH 297 357
ENSPTRP00000022470 KH 366 424
ENSPTRP00000022470 KH 437 497
ENSPTRP00000022470 KH 509 570
ENSPTRP00000022470 KH 583 643
ENSPTRP00000022470 KH 655 716
ENSPTRP00000022470 KH 729 790
ENSPTRP00000022470 KH 802 863
ENSPTRP00000022470 KH 875 967
ENSPTRP00000022470 KH 974 1034
ENSPTRP00000022470 KH 1054 1117
ENSPTRP00000022470 KH 1129 1190
ENSPTRP00000048557 KH 1 36
ENSPTRP00000048557 KH 49 107
ENSPTRP00000048557 KH 120 180
ENSPTRP00000048557 KH 192 253
ENSPTRP00000048557 KH 266 326
ENSPTRP00000048557 KH 338 399
ENSPTRP00000048557 KH 412 473
ENSPTRP00000048557 KH 485 546
ENSPTRP00000048557 KH 558 650
ENSPTRP00000048557 KH 657 717
ENSPTRP00000048557 KH 737 781

Links

Other KH family RBPs
Other Pan troglodytes RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.999
HDLBP Homo sapiens ENSG00000115677 N 0.998
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.988
HDLBP Macaca mulatta ENSMMUG00000004730 N 0.986
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.983
Hdlbp Mus musculus ENSMUSG00000034088 N 0.982
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.978
LOC100057882 Equus caballus ENSECAG00000012829 N 0.977
HDLBP Canis familiaris ENSCAFG00000012913 N 0.975
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.974
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.968
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.967
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.967
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.958
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.949
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.937
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.924
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.923
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.910
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.909
HDLBP Felis catus ENSFCAG00000010455 N 0.898
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.845
AAH44314 Xenopus laevis AAH44314 N 0.835
hdlbp Danio rerio ENSDARG00000009830 N 0.809
HDLBP Sorex araneus ENSSARG00000012639 N 0.806
HDLBP Oryzias latipes ENSORLG00000002226 N 0.800
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.790
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.789
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.786
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.765
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.744
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.736
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.735
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.728