CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
estExt_Genewise1Plus.C_70089
(
Capitella teleta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
estExt_Genewise1Plus.C_70089
T20975_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_70089
KH
105
157
VKRRQRLIGPNGSTLKAIELLTSCYVTVQGSTVAAIGKYSGLKFVRSIVTDCM
Links
Other
KH
family RBPs
Other
Capitella teleta
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100397686
Callithrix jacchus
ENSCJAG00000018257
N
0.000
PDCD11
Cavia porcellus
ENSCPOG00000010957
N
0.000
Pdcd11
Rattus norvegicus
ENSRNOG00000020304
N
0.000
Q6X9W2_HORSE
Equus caballus
ENSECAG00000020507
N
0.000