CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
CRE25062
(
Caenorhabditis remanei
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
CRE25062
T22679_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE25062
La
584
641
VRKQIEYYFSEDNLQKDFFLRRKMSPEGFLPVALIASFPRVRALTEDVLLIGEALKDS
Links
Other
La
family RBPs
Other
Caenorhabditis remanei
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH93491
Xenopus laevis
AAH93491
N
0.700
AGAP005291
Anopheles gambiae
AGAP005291
N
0.707
Bm1_56085
Brugia malayi
Bm1_56085
N
0.707
CBG16526
Caenorhabditis briggsae
CBG16526
N
0.948
CJA02747
Caenorhabditis japonica
CJA02747
N
0.845
GH13999
Drosophila grimshawi
FBgn0121475
N
0.707
GJ24490
Drosophila virilis
FBgn0211570
N
0.707
GK22522
Drosophila willistoni
FBgn0224499
N
0.707
larp-1
Caenorhabditis elegans
R144.7
N
0.879
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.700
LOAG_00811
Loa loa
LOAG_00811
N
0.707
Minc10117
Meloidogyne incognita
Minc10117
N
0.724
Minc17549
Meloidogyne incognita
Minc17549
N
0.707
PASA_GEN_26200017
Daphnia pulex
PASA_GEN_26200017
N
0.707
Ppa-larp-1
Pristionchus pacificus
PPA28527
N
0.793
WUBG_00690
Wuchereria bancrofti
WUBG_00690
N
0.707